| Parameters | Input.values |
|---|---|
| Folder name : | Example data |
| Sequence name : | CDH1 |
| Group : | Low methylated DNA |
| Experiment type : | Direct-BSP |
| Replicate number : | 3 |
| Date of sequencing #1 : | 2022-05-02 |
| Date of sequencing #2 : | 2022-05-02 |
| Date of analysis : | 2022-05-03 14:33 |
| Prefix of output files : | CDH1_Low methylated DNA_3 |
| Reference DNA sequence information | Input values |
|---|---|
| Name | CDH1 |
| Strand used for primer design | Plus strand |
| Length | 341 pb |
| Coordinates on reference genome | chr16:68770940-68771280 |
## CCACCGGCGGGGCTGGGATTCGAACCCAGTGGAATCAGAACCGTGCAGGTCCCATAACCCACCTAGACCCTAGCAACTCCAGGCTAGAGGGTCACCGCGTCTATGCGAGGCCGGGTGGGCGGGCCGTCAGCTCCGCCCTGGGGAGGGGTCCGCGCTGCTGATTGGCTGTGGCCGGCAGGTGAACCCTCAGCCAATCAGCGGTACGGGGGGCGGTGCCTCCGGGGCTCACCTGGCTGCAGCCACGCACCCCCTCTCAGTGGCGTCGGAACTGCAAAGCACCTGTGAGCTTGCGGAAGTCAGTTCAGACTCCAGCCCGCTCCAGCCCGGCCCGACCCGACCGC
## GCGGTCGGGTCGGGCCGGGCTGGAGCGGGCTGGAGTCTGAACTGACTTCCGCAAGCTCACAGGTGCTTTGCAGTTCCGACGCCACTGAGAGGGGGTGCGTGGCTGCAGCCAGGTGAGCCCCGGAGGCACCGCCCCCCGTACCGCTGATTGGCTGAGGGTTCACCTGCCGGCCACAGCCAATCAGCAGCGCGGACCCCTCCCCAGGGCGGAGCTGACGGCCCGCCCACCCGGCCTCGCATAGACGCGGTGACCCTCTAGCCTGGAGTTGCTAGGGTCTAGGTGGGTTATGGGACCTGCACGGTTCTGATTCCACTGGGTTCGAATCCCAGCCCCGCCGGTGG
| CG number | chr | start | end | C position | G position |
|---|---|---|---|---|---|
| 1 | chr16 | 68770944 | 68770945 | 5 | 6 |
| 2 | chr16 | 68770947 | 68770948 | 8 | 9 |
| 3 | chr16 | 68770960 | 68770961 | 21 | 22 |
| 4 | chr16 | 68770981 | 68770982 | 42 | 43 |
| 5 | chr16 | 68771035 | 68771036 | 96 | 97 |
| 6 | chr16 | 68771037 | 68771038 | 98 | 99 |
| 7 | chr16 | 68771045 | 68771046 | 106 | 107 |
| 8 | chr16 | 68771051 | 68771052 | 112 | 113 |
| 9 | chr16 | 68771059 | 68771060 | 120 | 121 |
| 10 | chr16 | 68771064 | 68771065 | 125 | 126 |
| 11 | chr16 | 68771073 | 68771074 | 134 | 135 |
| 12 | chr16 | 68771090 | 68771091 | 151 | 152 |
| 13 | chr16 | 68771092 | 68771093 | 153 | 154 |
| 14 | chr16 | 68771112 | 68771113 | 173 | 174 |
| 15 | chr16 | 68771138 | 68771139 | 199 | 200 |
| 16 | chr16 | 68771143 | 68771144 | 204 | 205 |
| 17 | chr16 | 68771150 | 68771151 | 211 | 212 |
| 18 | chr16 | 68771159 | 68771160 | 220 | 221 |
| 19 | chr16 | 68771182 | 68771183 | 243 | 244 |
| 20 | chr16 | 68771200 | 68771201 | 261 | 262 |
| 21 | chr16 | 68771203 | 68771204 | 264 | 265 |
| 22 | chr16 | 68771230 | 68771231 | 291 | 292 |
| 23 | chr16 | 68771254 | 68771255 | 315 | 316 |
| 24 | chr16 | 68771264 | 68771265 | 325 | 326 |
| 25 | chr16 | 68771269 | 68771270 | 330 | 331 |
| 26 | chr16 | 68771274 | 68771275 | 335 | 336 |
| 27 | chr16 | 68771278 | 68771279 | 339 | 340 |
| CG number | chr | start | end | C position | G position |
|---|---|---|---|---|---|
| 27 | chr16 | 68771278 | 68771279 | 2 | 3 |
| 26 | chr16 | 68771274 | 68771275 | 6 | 7 |
| 25 | chr16 | 68771269 | 68771270 | 11 | 12 |
| 24 | chr16 | 68771264 | 68771265 | 16 | 17 |
| 23 | chr16 | 68771254 | 68771255 | 26 | 27 |
| 22 | chr16 | 68771230 | 68771231 | 50 | 51 |
| 21 | chr16 | 68771203 | 68771204 | 77 | 78 |
| 20 | chr16 | 68771200 | 68771201 | 80 | 81 |
| 19 | chr16 | 68771182 | 68771183 | 98 | 99 |
| 18 | chr16 | 68771159 | 68771160 | 121 | 122 |
| 17 | chr16 | 68771150 | 68771151 | 130 | 131 |
| 16 | chr16 | 68771143 | 68771144 | 137 | 138 |
| 15 | chr16 | 68771138 | 68771139 | 142 | 143 |
| 14 | chr16 | 68771112 | 68771113 | 168 | 169 |
| 13 | chr16 | 68771092 | 68771093 | 188 | 189 |
| 12 | chr16 | 68771090 | 68771091 | 190 | 191 |
| 11 | chr16 | 68771073 | 68771074 | 207 | 208 |
| 10 | chr16 | 68771064 | 68771065 | 216 | 217 |
| 9 | chr16 | 68771059 | 68771060 | 221 | 222 |
| 8 | chr16 | 68771051 | 68771052 | 229 | 230 |
| 7 | chr16 | 68771045 | 68771046 | 235 | 236 |
| 6 | chr16 | 68771037 | 68771038 | 243 | 244 |
| 5 | chr16 | 68771035 | 68771036 | 245 | 246 |
| 4 | chr16 | 68770981 | 68770982 | 299 | 300 |
| 3 | chr16 | 68770960 | 68770961 | 320 | 321 |
| 2 | chr16 | 68770947 | 68770948 | 333 | 334 |
| 1 | chr16 | 68770944 | 68770945 | 336 | 337 |
Bisulfite converted sequence of the plus strand as indicated as the template strand.
## TTATCGGCGGGGTTGGGATTCGAATTTAGTGGAATTAGAATCGTGTAGGTTTTATAATTTATTTAGATTTTAGTAATTTTAGGTTAGAGGGTTATCGCGTTTATGCGAGGTCGGGTGGGCGGGTCGTTAGTTTCGTTTTGGGGAGGGGTTCGCGTTGTTGATTGGTTGTGGTCGGTAGGTGAATTTTTAGTTAATTAGCGGTACGGGGGGCGGTGTTTTCGGGGTTTATTTGGTTGTAGTTACGTATTTTTTTTTAGTGGCGTCGGAATTGTAAAGTATTTGTGAGTTTGCGGAAGTTAGTTTAGATTTTAGTTCGTTTTAGTTCGGTTCGATTCGATCGT
Reverse complement of the bisulfite converted sequence from the plus strand.
## ACGATCGAATCGAACCGAACTAAAACGAACTAAAATCTAAACTAACTTCCGCAAACTCACAAATACTTTACAATTCCGACGCCACTAAAAAAAAATACGTAACTACAACCAAATAAACCCCGAAAACACCGCCCCCCGTACCGCTAATTAACTAAAAATTCACCTACCGACCACAACCAATCAACAACGCGAACCCCTCCCCAAAACGAAACTAACGACCCGCCCACCCGACCTCGCATAAACGCGATAACCCTCTAACCTAAAATTACTAAAATCTAAATAAATTATAAAACCTACACGATTCTAATTCCACTAAATTCGAATCCCAACCCCGCCGATAA
| Thresholds | Values |
|---|---|
| Minimum length of the trimmed sequence : | 30 bp |
| Minimum Phred quality score : | 30 |
| Minimum ratio of primary peak : | 0.75 |
| Minimum percentage of non-mixed positions : | 75 % |
| Sequencing | Length | Start position | End position | Mean of Phred quality scores | Mean of primary peak ratio | Percentage of non-mixed positions | Trimmed sequence quality |
|---|---|---|---|---|---|---|---|
| #1 | 746 | 24 | 769 | 14.51 | 0.62 | 22.39 | Incorrect |
| #2 | 205 | 9 | 213 | 45.29 | 0.93 | 90.24 | Correct |
Sequence of primary peaks:
Length: 1275 bp
## AATTTTAGCGTGGTGCAGTAGATGATATTGGAGTGTGAGTAGTTGTGAGTTTGCTCGACTGTGCCTGCTAAGAAGAAGGTTCNGCTTNGCGTCGGTCCGGANGATGTCTAGCNGCCTGTGTTACGACGTCCTCTTCGTCNTCATGACCGACTTTGTCATACTTGCCAACCGCGTGTAACTTTCTTTGCGTTGGCCGTCTCCCGGGATCCTCTACTCTCNTTCGCTCGGTTGTGTTTCGGTAGTTGTGACTGTGGGGAGGACGGATCCTTGCANGCTGAAGATTCTTGATNACTAGGAAAGCCTCGTTGATGACTANTAATTACTAACTCTATCCCCNTCACTATTAAATTACGGAGTTCACCCGCGACTTTCTGTCTAGGGTGTGAGCTAGATGAATTCATCAATGCAATGCGCGTGAGCTCCATAACATTAANAGNTCNCTNCGATTTGATAATGCTTCAAAGTTTTNTTCTNTTTTTACAATGAGTCCCTCTACCAANCAGCCACAGAATATAATTGCAGGTGACTATTTCGCAAGTGGAGGTCTCTGTCAGTGACCTATGATTACTTATAGATTTCTCCGCCNACTACGAACGGCCGTGCACCACCCTCTATATACTTATANAGAGCTGTCGGTCTGTCAATCCTTAATATNTTTGGGACGTGGTATGGTGCGCCGTGGTGCGACAAATCAGAGGGCAGTCTCAACTCCTGGTGATGGCGTTCCGTGCCTCTCCATTAAGTGTCAGGCTTGCGTCTATTATCCCCCATGAAGACAAGGAATATGCATTCTGCNGGAGTGCCGATGCAGGCATAAGACCGTTNCCCCTGATTCTTACTCGGCCTNATTCATGCTGATTACTANTACGGTATTAGAGCTCCATCGATCCCCGTGCTNTCNGTTCNTGATCCAGTAATCGATCNTGCCGTACNGGTTTTTCAAAAAGATACCGTCTGNAATTCATGATGTCCCNNGGATTTCGNGAATTCANNGCCTTCCNNAGTCCCNTAAANCNACCANNNGCCTCTATAACCTGANCACAAANNNCGCCNCCTNNCCCNATTNNCCCGGNGGGGAGCCCCCGGGGCCCGGTTTGAAAAACCCNATATTTGTTTNAAAAAAGAGANNGGGGGCCCCCCCGCCCCNACNNATATAAAAANNANNNTNCCCAAAACAAAGAGAAATAAGGNTGNNCANNCTANNNNNNNNATGCCGCCCCNCACCANNAANAGAATNNNNANNGANAANNCNNNNNNNCGGNGANGAGNNGGGGG
Open chromatogram file in a new tab
| Position | A peak | T peak | G peak | C peak | Total | A ratio | T ratio | G ratio | C ratio | Primary base | Quality score | Primary ratio |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 77 | 70 | 30 | 8 | 185 | 0.42 | 0.38 | 0.16 | 0.04 | A | 2 | 0.42 |
| 2 | 107 | 97 | 1 | 14 | 219 | 0.49 | 0.44 | 0.00 | 0.06 | A | 6 | 0.49 |
| 3 | 0 | 67 | 1 | 50 | 118 | 0.00 | 0.57 | 0.01 | 0.42 | T | 3 | 0.57 |
| 4 | 49 | 97 | 7 | 27 | 180 | 0.27 | 0.54 | 0.04 | 0.15 | T | 3 | 0.54 |
| 5 | 0 | 146 | 0 | 2 | 148 | 0.00 | 0.99 | 0.00 | 0.01 | T | 4 | 0.99 |
| 6 | 34 | 113 | 6 | 27 | 180 | 0.19 | 0.63 | 0.03 | 0.15 | T | 5 | 0.63 |
| 7 | 105 | 66 | 0 | 36 | 207 | 0.51 | 0.32 | 0.00 | 0.17 | A | 5 | 0.51 |
| 8 | 42 | 0 | 1448 | 15 | 1505 | 0.03 | 0.00 | 0.96 | 0.01 | G | 10 | 0.96 |
| 9 | 10 | 0 | 0 | 23 | 33 | 0.30 | 0.00 | 0.00 | 0.70 | C | 5 | 0.70 |
| 10 | 36 | 0 | 990 | 0 | 1026 | 0.04 | 0.00 | 0.96 | 0.00 | G | 20 | 0.96 |
| 11 | 6 | 110 | 0 | 0 | 116 | 0.05 | 0.95 | 0.00 | 0.00 | T | 4 | 0.95 |
| 12 | 0 | 0 | 8 | 0 | 8 | 0.00 | 0.00 | 1.00 | 0.00 | G | 4 | 1.00 |
| 13 | 0 | 0 | 5124 | 2 | 5126 | 0.00 | 0.00 | 1.00 | 0.00 | G | 4 | 1.00 |
| 14 | 11245 | 20622 | 0 | 38 | 31905 | 0.35 | 0.65 | 0.00 | 0.00 | T | 5 | 0.65 |
| 15 | 0 | 0 | 259 | 0 | 259 | 0.00 | 0.00 | 1.00 | 0.00 | G | 5 | 1.00 |
| 16 | 0 | 0 | 0 | 726 | 726 | 0.00 | 0.00 | 0.00 | 1.00 | C | 4 | 1.00 |
| 17 | 7090 | 0 | 0 | 686 | 7776 | 0.91 | 0.00 | 0.00 | 0.09 | A | 4 | 0.91 |
| 18 | 0 | 0 | 20550 | 0 | 20550 | 0.00 | 0.00 | 1.00 | 0.00 | G | 5 | 1.00 |
| 19 | 0 | 7783 | 0 | 0 | 7783 | 0.00 | 1.00 | 0.00 | 0.00 | T | 4 | 1.00 |
| 20 | 5705 | 0 | 0 | 0 | 5705 | 1.00 | 0.00 | 0.00 | 0.00 | A | 6 | 1.00 |
| 21 | 0 | 0 | 4706 | 0 | 4706 | 0.00 | 0.00 | 1.00 | 0.00 | G | 6 | 1.00 |
| 22 | 6302 | 0 | 0 | 574 | 6876 | 0.92 | 0.00 | 0.00 | 0.08 | A | 5 | 0.92 |
| 23 | 0 | 388 | 0 | 0 | 388 | 0.00 | 1.00 | 0.00 | 0.00 | T | 6 | 1.00 |
| 24 | 0 | 283 | 14573 | 0 | 14856 | 0.00 | 0.02 | 0.98 | 0.00 | G | 36 | 0.98 |
| 25 | 530 | 0 | 0 | 0 | 530 | 1.00 | 0.00 | 0.00 | 0.00 | A | 5 | 1.00 |
| 26 | 0 | 2986 | 0 | 208 | 3194 | 0.00 | 0.93 | 0.00 | 0.07 | T | 10 | 0.93 |
| 27 | 3194 | 0 | 634 | 128 | 3956 | 0.81 | 0.00 | 0.16 | 0.03 | A | 17 | 0.81 |
| 28 | 0 | 2366 | 0 | 0 | 2366 | 0.00 | 1.00 | 0.00 | 0.00 | T | 10 | 1.00 |
| 29 | 0 | 3394 | 0 | 340 | 3734 | 0.00 | 0.91 | 0.00 | 0.09 | T | 33 | 0.91 |
| 30 | 0 | 0 | 7605 | 567 | 8172 | 0.00 | 0.00 | 0.93 | 0.07 | G | 17 | 0.93 |
| 31 | 642 | 619 | 2218 | 0 | 3479 | 0.18 | 0.18 | 0.64 | 0.00 | G | 12 | 0.64 |
| 32 | 2274 | 0 | 0 | 168 | 2442 | 0.93 | 0.00 | 0.00 | 0.07 | A | 15 | 0.93 |
| 33 | 0 | 1403 | 2230 | 131 | 3764 | 0.00 | 0.37 | 0.59 | 0.03 | G | 13 | 0.59 |
| 34 | 406 | 1586 | 0 | 218 | 2210 | 0.18 | 0.72 | 0.00 | 0.10 | T | 12 | 0.72 |
| 35 | 604 | 0 | 3285 | 0 | 3889 | 0.16 | 0.00 | 0.84 | 0.00 | G | 16 | 0.84 |
| 36 | 0 | 818 | 0 | 261 | 1079 | 0.00 | 0.76 | 0.00 | 0.24 | T | 8 | 0.76 |
| 37 | 778 | 0 | 1382 | 338 | 2498 | 0.31 | 0.00 | 0.55 | 0.14 | G | 17 | 0.55 |
| 38 | 764 | 395 | 0 | 329 | 1488 | 0.51 | 0.27 | 0.00 | 0.22 | A | 9 | 0.51 |
| 39 | 0 | 0 | 1973 | 266 | 2239 | 0.00 | 0.00 | 0.88 | 0.12 | G | 25 | 0.88 |
| 40 | 417 | 652 | 0 | 0 | 1069 | 0.39 | 0.61 | 0.00 | 0.00 | T | 11 | 0.61 |
| 41 | 1196 | 0 | 493 | 11 | 1700 | 0.70 | 0.00 | 0.29 | 0.01 | A | 17 | 0.70 |
| 42 | 0 | 658 | 781 | 0 | 1439 | 0.00 | 0.46 | 0.54 | 0.00 | G | 11 | 0.54 |
| 43 | 0 | 950 | 0 | 282 | 1232 | 0.00 | 0.77 | 0.00 | 0.23 | T | 13 | 0.77 |
| 44 | 430 | 967 | 88 | 91 | 1576 | 0.27 | 0.61 | 0.06 | 0.06 | T | 15 | 0.61 |
| 45 | 3 | 336 | 2858 | 0 | 3197 | 0.00 | 0.11 | 0.89 | 0.00 | G | 47 | 0.89 |
| 46 | 295 | 420 | 0 | 219 | 934 | 0.32 | 0.45 | 0.00 | 0.23 | T | 10 | 0.45 |
| 47 | 164 | 303 | 1858 | 0 | 2325 | 0.07 | 0.13 | 0.80 | 0.00 | G | 14 | 0.80 |
| 48 | 716 | 0 | 0 | 318 | 1034 | 0.69 | 0.00 | 0.00 | 0.31 | A | 9 | 0.69 |
| 49 | 0 | 5 | 1562 | 427 | 1994 | 0.00 | 0.00 | 0.78 | 0.21 | G | 7 | 0.78 |
| 50 | 140 | 420 | 0 | 0 | 560 | 0.25 | 0.75 | 0.00 | 0.00 | T | 6 | 0.75 |
| 51 | 58 | 896 | 124 | 0 | 1078 | 0.05 | 0.83 | 0.12 | 0.00 | T | 8 | 0.83 |
| 52 | 355 | 446 | 3 | 401 | 1205 | 0.29 | 0.37 | 0.00 | 0.33 | T | 10 | 0.37 |
| 53 | 5 | 1 | 762 | 719 | 1487 | 0.00 | 0.00 | 0.51 | 0.48 | G | 11 | 0.51 |
| 54 | 229 | 6 | 238 | 685 | 1158 | 0.20 | 0.01 | 0.21 | 0.59 | C | 14 | 0.59 |
| 55 | 4 | 710 | 236 | 0 | 950 | 0.00 | 0.75 | 0.25 | 0.00 | T | 15 | 0.75 |
| 56 | 29 | 385 | 132 | 1033 | 1579 | 0.02 | 0.24 | 0.08 | 0.65 | C | 22 | 0.65 |
| 57 | 46 | 507 | 859 | 145 | 1557 | 0.03 | 0.33 | 0.55 | 0.09 | G | 19 | 0.55 |
| 58 | 511 | 315 | 492 | 41 | 1359 | 0.38 | 0.23 | 0.36 | 0.03 | A | 10 | 0.38 |
| 59 | 4 | 0 | 0 | 587 | 591 | 0.01 | 0.00 | 0.00 | 0.99 | C | 13 | 0.99 |
| 60 | 64 | 792 | 107 | 324 | 1287 | 0.05 | 0.62 | 0.08 | 0.25 | T | 17 | 0.62 |
| 61 | 204 | 0 | 2916 | 0 | 3120 | 0.07 | 0.00 | 0.93 | 0.00 | G | 50 | 0.93 |
| 62 | 110 | 553 | 92 | 228 | 983 | 0.11 | 0.56 | 0.09 | 0.23 | T | 10 | 0.56 |
| 63 | 0 | 0 | 1326 | 0 | 1326 | 0.00 | 0.00 | 1.00 | 0.00 | G | 21 | 1.00 |
| 64 | 121 | 0 | 0 | 549 | 670 | 0.18 | 0.00 | 0.00 | 0.82 | C | 9 | 0.82 |
| 65 | 28 | 358 | 203 | 792 | 1381 | 0.02 | 0.26 | 0.15 | 0.57 | C | 17 | 0.57 |
| 66 | 60 | 612 | 88 | 318 | 1078 | 0.06 | 0.57 | 0.08 | 0.29 | T | 13 | 0.57 |
| 67 | 6 | 517 | 633 | 300 | 1456 | 0.00 | 0.36 | 0.43 | 0.21 | G | 11 | 0.43 |
| 68 | 67 | 225 | 0 | 809 | 1101 | 0.06 | 0.20 | 0.00 | 0.73 | C | 23 | 0.73 |
| 69 | 0 | 547 | 415 | 0 | 962 | 0.00 | 0.57 | 0.43 | 0.00 | T | 12 | 0.57 |
| 70 | 1825 | 205 | 0 | 23 | 2053 | 0.89 | 0.10 | 0.00 | 0.01 | A | 43 | 0.89 |
| 71 | 1138 | 297 | 81 | 253 | 1769 | 0.64 | 0.17 | 0.05 | 0.14 | A | 34 | 0.64 |
| 72 | 238 | 0 | 550 | 97 | 885 | 0.27 | 0.00 | 0.62 | 0.11 | G | 13 | 0.62 |
| 73 | 502 | 1 | 257 | 231 | 991 | 0.51 | 0.00 | 0.26 | 0.23 | A | 10 | 0.51 |
| 74 | 544 | 1 | 84 | 111 | 740 | 0.74 | 0.00 | 0.11 | 0.15 | A | 13 | 0.74 |
| 75 | 0 | 151 | 167 | 17 | 335 | 0.00 | 0.45 | 0.50 | 0.05 | G | 8 | 0.50 |
| 76 | 499 | 236 | 174 | 3 | 912 | 0.55 | 0.26 | 0.19 | 0.00 | A | 10 | 0.55 |
| 77 | 352 | 0 | 152 | 266 | 770 | 0.46 | 0.00 | 0.20 | 0.35 | A | 11 | 0.46 |
| 78 | 6 | 275 | 358 | 6 | 645 | 0.01 | 0.43 | 0.56 | 0.01 | G | 10 | 0.56 |
| 79 | 440 | 0 | 543 | 0 | 983 | 0.45 | 0.00 | 0.55 | 0.00 | G | 13 | 0.55 |
| 80 | 0 | 398 | 29 | 342 | 769 | 0.00 | 0.52 | 0.04 | 0.44 | T | 10 | 0.52 |
| 81 | 183 | 401 | 0 | 0 | 584 | 0.31 | 0.69 | 0.00 | 0.00 | T | 10 | 0.69 |
| 82 | 0 | 373 | 103 | 429 | 905 | 0.00 | 0.41 | 0.11 | 0.47 | C | 8 | 0.47 |
| 83 | 401 | 400 | 107 | 374 | 1282 | 0.31 | 0.31 | 0.08 | 0.29 | N | 13 | 0.31 |
| 84 | 257 | 0 | 459 | 0 | 716 | 0.36 | 0.00 | 0.64 | 0.00 | G | 10 | 0.64 |
| 85 | 0 | 269 | 165 | 474 | 908 | 0.00 | 0.30 | 0.18 | 0.52 | C | 11 | 0.52 |
| 86 | 68 | 746 | 239 | 0 | 1053 | 0.06 | 0.71 | 0.23 | 0.00 | T | 23 | 0.71 |
| 87 | 3 | 516 | 0 | 443 | 962 | 0.00 | 0.54 | 0.00 | 0.46 | T | 19 | 0.54 |
| 88 | 413 | 123 | 419 | 202 | 1157 | 0.36 | 0.11 | 0.36 | 0.17 | N | 13 | 0.36 |
| 89 | 206 | 180 | 479 | 27 | 892 | 0.23 | 0.20 | 0.54 | 0.03 | G | 13 | 0.54 |
| 90 | 8 | 317 | 0 | 394 | 719 | 0.01 | 0.44 | 0.00 | 0.55 | C | 13 | 0.55 |
| 91 | 2 | 423 | 835 | 48 | 1308 | 0.00 | 0.32 | 0.64 | 0.04 | G | 24 | 0.64 |
| 92 | 68 | 342 | 249 | 0 | 659 | 0.10 | 0.52 | 0.38 | 0.00 | T | 13 | 0.52 |
| 93 | 2 | 328 | 23 | 474 | 827 | 0.00 | 0.40 | 0.03 | 0.57 | C | 10 | 0.57 |
| 94 | 81 | 0 | 415 | 349 | 845 | 0.10 | 0.00 | 0.49 | 0.41 | G | 11 | 0.49 |
| 95 | 133 | 279 | 454 | 46 | 912 | 0.15 | 0.31 | 0.50 | 0.05 | G | 19 | 0.50 |
| 96 | 0 | 610 | 225 | 28 | 863 | 0.00 | 0.71 | 0.26 | 0.03 | T | 24 | 0.71 |
| 97 | 58 | 0 | 339 | 399 | 796 | 0.07 | 0.00 | 0.43 | 0.50 | C | 14 | 0.50 |
| 98 | 349 | 141 | 0 | 356 | 846 | 0.41 | 0.17 | 0.00 | 0.42 | C | 12 | 0.42 |
| 99 | 60 | 389 | 528 | 8 | 985 | 0.06 | 0.39 | 0.54 | 0.01 | G | 18 | 0.54 |
| 100 | 0 | 0 | 428 | 281 | 709 | 0.00 | 0.00 | 0.60 | 0.40 | G | 11 | 0.60 |
| 101 | 429 | 6 | 267 | 34 | 736 | 0.58 | 0.01 | 0.36 | 0.05 | A | 13 | 0.58 |
| 102 | 112 | 300 | 227 | 90 | 729 | 0.15 | 0.41 | 0.31 | 0.12 | N | 10 | 0.41 |
| 103 | 5 | 207 | 475 | 0 | 687 | 0.01 | 0.30 | 0.69 | 0.00 | G | 9 | 0.69 |
| 104 | 340 | 211 | 7 | 182 | 740 | 0.46 | 0.29 | 0.01 | 0.25 | A | 8 | 0.46 |
| 105 | 166 | 426 | 157 | 10 | 759 | 0.22 | 0.56 | 0.21 | 0.01 | T | 11 | 0.56 |
| 106 | 231 | 19 | 573 | 372 | 1195 | 0.19 | 0.02 | 0.48 | 0.31 | G | 15 | 0.48 |
| 107 | 0 | 499 | 6 | 299 | 804 | 0.00 | 0.62 | 0.01 | 0.37 | T | 17 | 0.62 |
| 108 | 61 | 4 | 371 | 466 | 902 | 0.07 | 0.00 | 0.41 | 0.52 | C | 12 | 0.52 |
| 109 | 61 | 337 | 0 | 278 | 676 | 0.09 | 0.50 | 0.00 | 0.41 | T | 9 | 0.50 |
| 110 | 418 | 0 | 350 | 3 | 771 | 0.54 | 0.00 | 0.45 | 0.00 | A | 10 | 0.54 |
| 111 | 0 | 63 | 309 | 297 | 669 | 0.00 | 0.09 | 0.46 | 0.44 | G | 8 | 0.46 |
| 112 | 129 | 3 | 0 | 269 | 401 | 0.32 | 0.01 | 0.00 | 0.67 | C | 10 | 0.67 |
| 113 | 390 | 166 | 106 | 401 | 1063 | 0.37 | 0.16 | 0.10 | 0.38 | N | 13 | 0.38 |
| 114 | 215 | 59 | 660 | 0 | 934 | 0.23 | 0.06 | 0.71 | 0.00 | G | 13 | 0.71 |
| 115 | 258 | 0 | 12 | 279 | 549 | 0.47 | 0.00 | 0.02 | 0.51 | C | 10 | 0.51 |
| 116 | 27 | 287 | 0 | 292 | 606 | 0.04 | 0.47 | 0.00 | 0.48 | C | 11 | 0.48 |
| 117 | 2 | 417 | 117 | 409 | 945 | 0.00 | 0.44 | 0.12 | 0.43 | T | 10 | 0.44 |
| 118 | 137 | 209 | 536 | 31 | 913 | 0.15 | 0.23 | 0.59 | 0.03 | G | 13 | 0.59 |
| 119 | 366 | 385 | 14 | 53 | 818 | 0.45 | 0.47 | 0.02 | 0.06 | T | 11 | 0.47 |
| 120 | 3 | 305 | 713 | 0 | 1021 | 0.00 | 0.30 | 0.70 | 0.00 | G | 23 | 0.70 |
| 121 | 9 | 377 | 85 | 334 | 805 | 0.01 | 0.47 | 0.11 | 0.41 | T | 13 | 0.47 |
| 122 | 275 | 323 | 0 | 25 | 623 | 0.44 | 0.52 | 0.00 | 0.04 | T | 11 | 0.52 |
| 123 | 323 | 41 | 183 | 0 | 547 | 0.59 | 0.07 | 0.33 | 0.00 | A | 13 | 0.59 |
| 124 | 93 | 5 | 0 | 690 | 788 | 0.12 | 0.01 | 0.00 | 0.88 | C | 21 | 0.88 |
| 125 | 69 | 56 | 494 | 3 | 622 | 0.11 | 0.09 | 0.79 | 0.00 | G | 14 | 0.79 |
| 126 | 554 | 331 | 19 | 93 | 997 | 0.56 | 0.33 | 0.02 | 0.09 | A | 11 | 0.56 |
| 127 | 175 | 0 | 39 | 674 | 888 | 0.20 | 0.00 | 0.04 | 0.76 | C | 17 | 0.76 |
| 128 | 0 | 245 | 583 | 3 | 831 | 0.00 | 0.29 | 0.70 | 0.00 | G | 8 | 0.70 |
| 129 | 347 | 384 | 0 | 48 | 779 | 0.45 | 0.49 | 0.00 | 0.06 | T | 10 | 0.49 |
| 130 | 8 | 362 | 201 | 382 | 953 | 0.01 | 0.38 | 0.21 | 0.40 | C | 10 | 0.40 |
| 131 | 29 | 236 | 108 | 250 | 623 | 0.05 | 0.38 | 0.17 | 0.40 | C | 8 | 0.40 |
| 132 | 363 | 452 | 45 | 0 | 860 | 0.42 | 0.53 | 0.05 | 0.00 | T | 13 | 0.53 |
| 133 | 0 | 0 | 45 | 589 | 634 | 0.00 | 0.00 | 0.07 | 0.93 | C | 19 | 0.93 |
| 134 | 283 | 448 | 3 | 115 | 849 | 0.33 | 0.53 | 0.00 | 0.14 | T | 11 | 0.53 |
| 135 | 0 | 592 | 132 | 6 | 730 | 0.00 | 0.81 | 0.18 | 0.01 | T | 14 | 0.81 |
| 136 | 136 | 7 | 120 | 674 | 937 | 0.15 | 0.01 | 0.13 | 0.72 | C | 22 | 0.72 |
| 137 | 73 | 19 | 467 | 291 | 850 | 0.09 | 0.02 | 0.55 | 0.34 | G | 14 | 0.55 |
| 138 | 92 | 407 | 127 | 48 | 674 | 0.14 | 0.60 | 0.19 | 0.07 | T | 13 | 0.60 |
| 139 | 45 | 0 | 150 | 701 | 896 | 0.05 | 0.00 | 0.17 | 0.78 | C | 28 | 0.78 |
| 140 | 149 | 262 | 94 | 200 | 705 | 0.21 | 0.37 | 0.13 | 0.28 | N | 12 | 0.37 |
| 141 | 295 | 364 | 23 | 36 | 718 | 0.41 | 0.51 | 0.03 | 0.05 | T | 13 | 0.51 |
| 142 | 234 | 22 | 216 | 410 | 882 | 0.27 | 0.02 | 0.24 | 0.46 | C | 8 | 0.46 |
| 143 | 314 | 0 | 115 | 6 | 435 | 0.72 | 0.00 | 0.26 | 0.01 | A | 9 | 0.72 |
| 144 | 129 | 462 | 0 | 44 | 635 | 0.20 | 0.73 | 0.00 | 0.07 | T | 11 | 0.73 |
| 145 | 0 | 4 | 627 | 398 | 1029 | 0.00 | 0.00 | 0.61 | 0.39 | G | 11 | 0.61 |
| 146 | 616 | 0 | 0 | 2 | 618 | 1.00 | 0.00 | 0.00 | 0.00 | A | 11 | 1.00 |
| 147 | 0 | 217 | 11 | 320 | 548 | 0.00 | 0.40 | 0.02 | 0.58 | C | 12 | 0.58 |
| 148 | 38 | 27 | 336 | 431 | 832 | 0.05 | 0.03 | 0.40 | 0.52 | C | 11 | 0.52 |
| 149 | 211 | 47 | 499 | 0 | 757 | 0.28 | 0.06 | 0.66 | 0.00 | G | 10 | 0.66 |
| 150 | 256 | 126 | 38 | 237 | 657 | 0.39 | 0.19 | 0.06 | 0.36 | A | 8 | 0.39 |
| 151 | 13 | 167 | 307 | 438 | 925 | 0.01 | 0.18 | 0.33 | 0.47 | C | 10 | 0.47 |
| 152 | 99 | 511 | 181 | 21 | 812 | 0.12 | 0.63 | 0.22 | 0.03 | T | 18 | 0.63 |
| 153 | 257 | 598 | 210 | 63 | 1128 | 0.23 | 0.53 | 0.19 | 0.06 | T | 18 | 0.53 |
| 154 | 139 | 761 | 362 | 157 | 1419 | 0.10 | 0.54 | 0.26 | 0.11 | T | 28 | 0.54 |
| 155 | 86 | 143 | 1230 | 7 | 1466 | 0.06 | 0.10 | 0.84 | 0.00 | G | 21 | 0.84 |
| 156 | 0 | 619 | 0 | 57 | 676 | 0.00 | 0.92 | 0.00 | 0.08 | T | 11 | 0.92 |
| 157 | 333 | 60 | 298 | 613 | 1304 | 0.26 | 0.05 | 0.23 | 0.47 | C | 9 | 0.47 |
| 158 | 218 | 213 | 183 | 48 | 662 | 0.33 | 0.32 | 0.28 | 0.07 | A | 10 | 0.33 |
| 159 | 393 | 454 | 297 | 0 | 1144 | 0.34 | 0.40 | 0.26 | 0.00 | T | 9 | 0.40 |
| 160 | 349 | 44 | 162 | 338 | 893 | 0.39 | 0.05 | 0.18 | 0.38 | A | 13 | 0.39 |
| 161 | 0 | 0 | 0 | 509 | 509 | 0.00 | 0.00 | 0.00 | 1.00 | C | 14 | 1.00 |
| 162 | 5 | 448 | 0 | 0 | 453 | 0.01 | 0.99 | 0.00 | 0.00 | T | 15 | 0.99 |
| 163 | 44 | 335 | 312 | 243 | 934 | 0.05 | 0.36 | 0.33 | 0.26 | T | 13 | 0.36 |
| 164 | 77 | 332 | 374 | 12 | 795 | 0.10 | 0.42 | 0.47 | 0.02 | G | 13 | 0.47 |
| 165 | 324 | 2 | 327 | 379 | 1032 | 0.31 | 0.00 | 0.32 | 0.37 | C | 13 | 0.37 |
| 166 | 6 | 244 | 0 | 412 | 662 | 0.01 | 0.37 | 0.00 | 0.62 | C | 11 | 0.62 |
| 167 | 569 | 153 | 155 | 0 | 877 | 0.65 | 0.17 | 0.18 | 0.00 | A | 21 | 0.65 |
| 168 | 401 | 50 | 11 | 335 | 797 | 0.50 | 0.06 | 0.01 | 0.42 | A | 18 | 0.50 |
| 169 | 0 | 2 | 279 | 499 | 780 | 0.00 | 0.00 | 0.36 | 0.64 | C | 18 | 0.64 |
| 170 | 249 | 135 | 48 | 309 | 741 | 0.34 | 0.18 | 0.06 | 0.42 | C | 13 | 0.42 |
| 171 | 187 | 19 | 444 | 42 | 692 | 0.27 | 0.03 | 0.64 | 0.06 | G | 13 | 0.64 |
| 172 | 25 | 313 | 11 | 396 | 745 | 0.03 | 0.42 | 0.01 | 0.53 | C | 13 | 0.53 |
| 173 | 334 | 15 | 525 | 3 | 877 | 0.38 | 0.02 | 0.60 | 0.00 | G | 17 | 0.60 |
| 174 | 6 | 476 | 206 | 117 | 805 | 0.01 | 0.59 | 0.26 | 0.15 | T | 18 | 0.59 |
| 175 | 38 | 292 | 671 | 96 | 1097 | 0.03 | 0.27 | 0.61 | 0.09 | G | 17 | 0.61 |
| 176 | 19 | 477 | 136 | 363 | 995 | 0.02 | 0.48 | 0.14 | 0.36 | T | 15 | 0.48 |
| 177 | 358 | 310 | 51 | 14 | 733 | 0.49 | 0.42 | 0.07 | 0.02 | A | 10 | 0.49 |
| 178 | 454 | 150 | 187 | 22 | 813 | 0.56 | 0.18 | 0.23 | 0.03 | A | 10 | 0.56 |
| 179 | 126 | 0 | 157 | 237 | 520 | 0.24 | 0.00 | 0.30 | 0.46 | C | 6 | 0.46 |
| 180 | 177 | 407 | 8 | 403 | 995 | 0.18 | 0.41 | 0.01 | 0.41 | T | 10 | 0.41 |
| 181 | 7 | 476 | 309 | 109 | 901 | 0.01 | 0.53 | 0.34 | 0.12 | T | 10 | 0.53 |
| 182 | 24 | 442 | 5 | 224 | 695 | 0.03 | 0.64 | 0.01 | 0.32 | T | 8 | 0.64 |
| 183 | 309 | 0 | 113 | 448 | 870 | 0.36 | 0.00 | 0.13 | 0.51 | C | 12 | 0.51 |
| 184 | 232 | 470 | 3 | 41 | 746 | 0.31 | 0.63 | 0.00 | 0.05 | T | 13 | 0.63 |
| 185 | 419 | 420 | 84 | 67 | 990 | 0.42 | 0.42 | 0.08 | 0.07 | T | 13 | 0.42 |
| 186 | 93 | 481 | 375 | 56 | 1005 | 0.09 | 0.48 | 0.37 | 0.06 | T | 13 | 0.48 |
| 187 | 0 | 100 | 470 | 279 | 849 | 0.00 | 0.12 | 0.55 | 0.33 | G | 13 | 0.55 |
| 188 | 196 | 348 | 7 | 427 | 978 | 0.20 | 0.36 | 0.01 | 0.44 | C | 11 | 0.44 |
| 189 | 269 | 0 | 421 | 38 | 728 | 0.37 | 0.00 | 0.58 | 0.05 | G | 13 | 0.58 |
| 190 | 12 | 499 | 112 | 386 | 1009 | 0.01 | 0.49 | 0.11 | 0.38 | T | 16 | 0.49 |
| 191 | 2 | 842 | 8 | 0 | 852 | 0.00 | 0.99 | 0.01 | 0.00 | T | 27 | 0.99 |
| 192 | 80 | 363 | 569 | 227 | 1239 | 0.06 | 0.29 | 0.46 | 0.18 | G | 14 | 0.46 |
| 193 | 63 | 357 | 632 | 32 | 1084 | 0.06 | 0.33 | 0.58 | 0.03 | G | 23 | 0.58 |
| 194 | 90 | 315 | 18 | 341 | 764 | 0.12 | 0.41 | 0.02 | 0.45 | C | 13 | 0.45 |
| 195 | 0 | 29 | 159 | 579 | 767 | 0.00 | 0.04 | 0.21 | 0.75 | C | 12 | 0.75 |
| 196 | 202 | 11 | 375 | 12 | 600 | 0.34 | 0.02 | 0.62 | 0.02 | G | 8 | 0.62 |
| 197 | 45 | 384 | 5 | 12 | 446 | 0.10 | 0.86 | 0.01 | 0.03 | T | 10 | 0.86 |
| 198 | 149 | 200 | 52 | 618 | 1019 | 0.15 | 0.20 | 0.05 | 0.61 | C | 10 | 0.61 |
| 199 | 143 | 327 | 304 | 20 | 794 | 0.18 | 0.41 | 0.38 | 0.03 | T | 9 | 0.41 |
| 200 | 107 | 192 | 0 | 469 | 768 | 0.14 | 0.25 | 0.00 | 0.61 | C | 9 | 0.61 |
| 201 | 6 | 88 | 21 | 642 | 757 | 0.01 | 0.12 | 0.03 | 0.85 | C | 18 | 0.85 |
| 202 | 287 | 3 | 9 | 344 | 643 | 0.45 | 0.00 | 0.01 | 0.53 | C | 10 | 0.53 |
| 203 | 0 | 40 | 363 | 187 | 590 | 0.00 | 0.07 | 0.62 | 0.32 | G | 10 | 0.62 |
| 204 | 320 | 0 | 536 | 11 | 867 | 0.37 | 0.00 | 0.62 | 0.01 | G | 12 | 0.62 |
| 205 | 18 | 303 | 371 | 83 | 775 | 0.02 | 0.39 | 0.48 | 0.11 | G | 8 | 0.48 |
| 206 | 718 | 0 | 5 | 172 | 895 | 0.80 | 0.00 | 0.01 | 0.19 | A | 17 | 0.80 |
| 207 | 0 | 371 | 319 | 0 | 690 | 0.00 | 0.54 | 0.46 | 0.00 | T | 10 | 0.54 |
| 208 | 176 | 0 | 25 | 352 | 553 | 0.32 | 0.00 | 0.05 | 0.64 | C | 13 | 0.64 |
| 209 | 251 | 185 | 0 | 422 | 858 | 0.29 | 0.22 | 0.00 | 0.49 | C | 13 | 0.49 |
| 210 | 118 | 578 | 33 | 0 | 729 | 0.16 | 0.79 | 0.05 | 0.00 | T | 23 | 0.79 |
| 211 | 0 | 6 | 69 | 853 | 928 | 0.00 | 0.01 | 0.07 | 0.92 | C | 34 | 0.92 |
| 212 | 178 | 342 | 147 | 7 | 674 | 0.26 | 0.51 | 0.22 | 0.01 | T | 11 | 0.51 |
| 213 | 429 | 6 | 1 | 241 | 677 | 0.63 | 0.01 | 0.00 | 0.36 | A | 23 | 0.63 |
| 214 | 12 | 277 | 56 | 446 | 791 | 0.02 | 0.35 | 0.07 | 0.56 | C | 13 | 0.56 |
| 215 | 295 | 371 | 0 | 222 | 888 | 0.33 | 0.42 | 0.00 | 0.25 | T | 14 | 0.42 |
| 216 | 211 | 0 | 204 | 579 | 994 | 0.21 | 0.00 | 0.21 | 0.58 | C | 17 | 0.58 |
| 217 | 30 | 372 | 80 | 0 | 482 | 0.06 | 0.77 | 0.17 | 0.00 | T | 13 | 0.77 |
| 218 | 180 | 28 | 365 | 401 | 974 | 0.18 | 0.03 | 0.37 | 0.41 | C | 9 | 0.41 |
| 219 | 179 | 371 | 94 | 188 | 832 | 0.22 | 0.45 | 0.11 | 0.23 | N | 8 | 0.45 |
| 220 | 0 | 550 | 19 | 69 | 638 | 0.00 | 0.86 | 0.03 | 0.11 | T | 12 | 0.86 |
| 221 | 0 | 613 | 3 | 8 | 624 | 0.00 | 0.98 | 0.00 | 0.01 | T | 11 | 0.98 |
| 222 | 14 | 2 | 0 | 565 | 581 | 0.02 | 0.00 | 0.00 | 0.97 | C | 13 | 0.97 |
| 223 | 220 | 1 | 506 | 0 | 727 | 0.30 | 0.00 | 0.70 | 0.00 | G | 11 | 0.70 |
| 224 | 218 | 8 | 131 | 287 | 644 | 0.34 | 0.01 | 0.20 | 0.45 | C | 9 | 0.45 |
| 225 | 191 | 441 | 66 | 32 | 730 | 0.26 | 0.60 | 0.09 | 0.04 | T | 10 | 0.60 |
| 226 | 97 | 0 | 262 | 462 | 821 | 0.12 | 0.00 | 0.32 | 0.56 | C | 11 | 0.56 |
| 227 | 0 | 377 | 471 | 0 | 848 | 0.00 | 0.44 | 0.56 | 0.00 | G | 19 | 0.56 |
| 228 | 72 | 334 | 635 | 6 | 1047 | 0.07 | 0.32 | 0.61 | 0.01 | G | 17 | 0.61 |
| 229 | 412 | 425 | 205 | 92 | 1134 | 0.36 | 0.37 | 0.18 | 0.08 | T | 12 | 0.37 |
| 230 | 73 | 453 | 174 | 0 | 700 | 0.10 | 0.65 | 0.25 | 0.00 | T | 13 | 0.65 |
| 231 | 35 | 0 | 367 | 357 | 759 | 0.05 | 0.00 | 0.48 | 0.47 | G | 13 | 0.48 |
| 232 | 394 | 438 | 0 | 69 | 901 | 0.44 | 0.49 | 0.00 | 0.08 | T | 11 | 0.49 |
| 233 | 194 | 23 | 536 | 17 | 770 | 0.25 | 0.03 | 0.70 | 0.02 | G | 19 | 0.70 |
| 234 | 54 | 430 | 91 | 271 | 846 | 0.06 | 0.51 | 0.11 | 0.32 | T | 12 | 0.51 |
| 235 | 103 | 443 | 327 | 3 | 876 | 0.12 | 0.51 | 0.37 | 0.00 | T | 14 | 0.51 |
| 236 | 329 | 529 | 9 | 53 | 920 | 0.36 | 0.58 | 0.01 | 0.06 | T | 16 | 0.58 |
| 237 | 0 | 315 | 3 | 386 | 704 | 0.00 | 0.45 | 0.00 | 0.55 | C | 11 | 0.55 |
| 238 | 0 | 109 | 302 | 12 | 423 | 0.00 | 0.26 | 0.71 | 0.03 | G | 13 | 0.71 |
| 239 | 0 | 81 | 449 | 12 | 542 | 0.00 | 0.15 | 0.83 | 0.02 | G | 18 | 0.83 |
| 240 | 250 | 345 | 292 | 44 | 931 | 0.27 | 0.37 | 0.31 | 0.05 | T | 8 | 0.37 |
| 241 | 347 | 345 | 0 | 240 | 932 | 0.37 | 0.37 | 0.00 | 0.26 | A | 8 | 0.37 |
| 242 | 33 | 119 | 423 | 379 | 954 | 0.03 | 0.12 | 0.44 | 0.40 | G | 11 | 0.44 |
| 243 | 1 | 458 | 304 | 5 | 768 | 0.00 | 0.60 | 0.40 | 0.01 | T | 10 | 0.60 |
| 244 | 44 | 413 | 0 | 189 | 646 | 0.07 | 0.64 | 0.00 | 0.29 | T | 11 | 0.64 |
| 245 | 0 | 0 | 532 | 0 | 532 | 0.00 | 0.00 | 1.00 | 0.00 | G | 16 | 1.00 |
| 246 | 72 | 449 | 0 | 107 | 628 | 0.11 | 0.71 | 0.00 | 0.17 | T | 11 | 0.71 |
| 247 | 153 | 285 | 621 | 4 | 1063 | 0.14 | 0.27 | 0.58 | 0.00 | G | 21 | 0.58 |
| 248 | 328 | 0 | 245 | 10 | 583 | 0.56 | 0.00 | 0.42 | 0.02 | A | 7 | 0.56 |
| 249 | 8 | 317 | 1 | 367 | 693 | 0.01 | 0.46 | 0.00 | 0.53 | C | 13 | 0.53 |
| 250 | 141 | 288 | 86 | 0 | 515 | 0.27 | 0.56 | 0.17 | 0.00 | T | 16 | 0.56 |
| 251 | 292 | 27 | 398 | 30 | 747 | 0.39 | 0.04 | 0.53 | 0.04 | G | 12 | 0.53 |
| 252 | 162 | 207 | 47 | 20 | 436 | 0.37 | 0.47 | 0.11 | 0.05 | T | 6 | 0.47 |
| 253 | 0 | 305 | 346 | 150 | 801 | 0.00 | 0.38 | 0.43 | 0.19 | G | 8 | 0.43 |
| 254 | 286 | 16 | 613 | 212 | 1127 | 0.25 | 0.01 | 0.54 | 0.19 | G | 19 | 0.54 |
| 255 | 114 | 129 | 300 | 0 | 543 | 0.21 | 0.24 | 0.55 | 0.00 | G | 8 | 0.55 |
| 256 | 38 | 324 | 361 | 245 | 968 | 0.04 | 0.33 | 0.37 | 0.25 | G | 10 | 0.37 |
| 257 | 347 | 4 | 334 | 6 | 691 | 0.50 | 0.01 | 0.48 | 0.01 | A | 12 | 0.50 |
| 258 | 192 | 0 | 583 | 43 | 818 | 0.23 | 0.00 | 0.71 | 0.05 | G | 18 | 0.71 |
| 259 | 140 | 19 | 399 | 0 | 558 | 0.25 | 0.03 | 0.72 | 0.00 | G | 10 | 0.72 |
| 260 | 370 | 174 | 58 | 274 | 876 | 0.42 | 0.20 | 0.07 | 0.31 | A | 11 | 0.42 |
| 261 | 144 | 36 | 97 | 350 | 627 | 0.23 | 0.06 | 0.15 | 0.56 | C | 8 | 0.56 |
| 262 | 7 | 208 | 311 | 0 | 526 | 0.01 | 0.40 | 0.59 | 0.00 | G | 13 | 0.59 |
| 263 | 292 | 0 | 386 | 60 | 738 | 0.40 | 0.00 | 0.52 | 0.08 | G | 18 | 0.52 |
| 264 | 273 | 3 | 126 | 67 | 469 | 0.58 | 0.01 | 0.27 | 0.14 | A | 10 | 0.58 |
| 265 | 0 | 487 | 32 | 9 | 528 | 0.00 | 0.92 | 0.06 | 0.02 | T | 17 | 0.92 |
| 266 | 301 | 7 | 162 | 398 | 868 | 0.35 | 0.01 | 0.19 | 0.46 | C | 12 | 0.46 |
| 267 | 200 | 23 | 55 | 489 | 767 | 0.26 | 0.03 | 0.07 | 0.64 | C | 15 | 0.64 |
| 268 | 195 | 358 | 56 | 23 | 632 | 0.31 | 0.57 | 0.09 | 0.04 | T | 13 | 0.57 |
| 269 | 107 | 598 | 13 | 316 | 1034 | 0.10 | 0.58 | 0.01 | 0.31 | T | 18 | 0.58 |
| 270 | 1 | 363 | 579 | 77 | 1020 | 0.00 | 0.36 | 0.57 | 0.08 | G | 23 | 0.57 |
| 271 | 4 | 318 | 231 | 320 | 873 | 0.00 | 0.36 | 0.26 | 0.37 | C | 10 | 0.37 |
| 272 | 297 | 120 | 252 | 0 | 669 | 0.44 | 0.18 | 0.38 | 0.00 | A | 11 | 0.44 |
| 273 | 247 | 337 | 184 | 108 | 876 | 0.28 | 0.38 | 0.21 | 0.12 | N | 13 | 0.38 |
| 274 | 198 | 263 | 291 | 8 | 760 | 0.26 | 0.35 | 0.38 | 0.01 | G | 11 | 0.38 |
| 275 | 328 | 195 | 29 | 350 | 902 | 0.36 | 0.22 | 0.03 | 0.39 | C | 11 | 0.39 |
| 276 | 0 | 361 | 0 | 260 | 621 | 0.00 | 0.58 | 0.00 | 0.42 | T | 9 | 0.58 |
| 277 | 0 | 44 | 472 | 440 | 956 | 0.00 | 0.05 | 0.49 | 0.46 | G | 13 | 0.49 |
| 278 | 326 | 287 | 9 | 22 | 644 | 0.51 | 0.45 | 0.01 | 0.03 | A | 12 | 0.51 |
| 279 | 275 | 242 | 47 | 86 | 650 | 0.42 | 0.37 | 0.07 | 0.13 | A | 10 | 0.42 |
| 280 | 242 | 31 | 398 | 0 | 671 | 0.36 | 0.05 | 0.59 | 0.00 | G | 18 | 0.59 |
| 281 | 365 | 3 | 74 | 244 | 686 | 0.53 | 0.00 | 0.11 | 0.36 | A | 13 | 0.53 |
| 282 | 311 | 338 | 0 | 30 | 679 | 0.46 | 0.50 | 0.00 | 0.04 | T | 13 | 0.50 |
| 283 | 217 | 229 | 137 | 5 | 588 | 0.37 | 0.39 | 0.23 | 0.01 | T | 11 | 0.39 |
| 284 | 0 | 343 | 76 | 397 | 816 | 0.00 | 0.42 | 0.09 | 0.49 | C | 15 | 0.49 |
| 285 | 43 | 232 | 220 | 3 | 498 | 0.09 | 0.47 | 0.44 | 0.01 | T | 14 | 0.47 |
| 286 | 70 | 375 | 0 | 264 | 709 | 0.10 | 0.53 | 0.00 | 0.37 | T | 12 | 0.53 |
| 287 | 1 | 293 | 430 | 5 | 729 | 0.00 | 0.40 | 0.59 | 0.01 | G | 19 | 0.59 |
| 288 | 306 | 0 | 0 | 291 | 597 | 0.51 | 0.00 | 0.00 | 0.49 | A | 13 | 0.51 |
| 289 | 0 | 615 | 75 | 5 | 695 | 0.00 | 0.88 | 0.11 | 0.01 | T | 23 | 0.88 |
| 290 | 179 | 213 | 59 | 176 | 627 | 0.29 | 0.34 | 0.09 | 0.28 | N | 10 | 0.34 |
| 291 | 644 | 5 | 153 | 6 | 808 | 0.80 | 0.01 | 0.19 | 0.01 | A | 30 | 0.80 |
| 292 | 124 | 24 | 143 | 313 | 604 | 0.21 | 0.04 | 0.24 | 0.52 | C | 13 | 0.52 |
| 293 | 291 | 481 | 65 | 0 | 837 | 0.35 | 0.57 | 0.08 | 0.00 | T | 23 | 0.57 |
| 294 | 548 | 9 | 11 | 134 | 702 | 0.78 | 0.01 | 0.02 | 0.19 | A | 27 | 0.78 |
| 295 | 34 | 11 | 395 | 143 | 583 | 0.06 | 0.02 | 0.68 | 0.25 | G | 18 | 0.68 |
| 296 | 24 | 226 | 423 | 3 | 676 | 0.04 | 0.33 | 0.63 | 0.00 | G | 23 | 0.63 |
| 297 | 660 | 9 | 5 | 111 | 785 | 0.84 | 0.01 | 0.01 | 0.14 | A | 28 | 0.84 |
| 298 | 263 | 222 | 59 | 0 | 544 | 0.48 | 0.41 | 0.11 | 0.00 | A | 13 | 0.48 |
| 299 | 278 | 250 | 55 | 17 | 600 | 0.46 | 0.42 | 0.09 | 0.03 | A | 13 | 0.46 |
| 300 | 71 | 328 | 332 | 273 | 1004 | 0.07 | 0.33 | 0.33 | 0.27 | G | 13 | 0.33 |
| 301 | 0 | 6 | 116 | 636 | 758 | 0.00 | 0.01 | 0.15 | 0.84 | C | 24 | 0.84 |
| 302 | 87 | 311 | 56 | 361 | 815 | 0.11 | 0.38 | 0.07 | 0.44 | C | 12 | 0.44 |
| 303 | 130 | 228 | 40 | 201 | 599 | 0.22 | 0.38 | 0.07 | 0.34 | T | 11 | 0.38 |
| 304 | 216 | 122 | 5 | 399 | 742 | 0.29 | 0.16 | 0.01 | 0.54 | C | 19 | 0.54 |
| 305 | 0 | 174 | 270 | 167 | 611 | 0.00 | 0.28 | 0.44 | 0.27 | G | 11 | 0.44 |
| 306 | 34 | 570 | 226 | 2 | 832 | 0.04 | 0.69 | 0.27 | 0.00 | T | 34 | 0.69 |
| 307 | 77 | 580 | 15 | 158 | 830 | 0.09 | 0.70 | 0.02 | 0.19 | T | 31 | 0.70 |
| 308 | 8 | 5 | 893 | 0 | 906 | 0.01 | 0.01 | 0.99 | 0.00 | G | 43 | 0.99 |
| 309 | 476 | 220 | 7 | 173 | 876 | 0.54 | 0.25 | 0.01 | 0.20 | A | 24 | 0.54 |
| 310 | 262 | 468 | 0 | 35 | 765 | 0.34 | 0.61 | 0.00 | 0.05 | T | 24 | 0.61 |
| 311 | 5 | 318 | 328 | 48 | 699 | 0.01 | 0.45 | 0.47 | 0.07 | G | 10 | 0.47 |
| 312 | 785 | 4 | 134 | 0 | 923 | 0.85 | 0.00 | 0.15 | 0.00 | A | 23 | 0.85 |
| 313 | 176 | 2 | 36 | 417 | 631 | 0.28 | 0.00 | 0.06 | 0.66 | C | 17 | 0.66 |
| 314 | 0 | 177 | 107 | 158 | 442 | 0.00 | 0.40 | 0.24 | 0.36 | T | 10 | 0.40 |
| 315 | 538 | 5 | 194 | 16 | 753 | 0.71 | 0.01 | 0.26 | 0.02 | A | 27 | 0.71 |
| 316 | 231 | 292 | 126 | 90 | 739 | 0.31 | 0.40 | 0.17 | 0.12 | N | 12 | 0.40 |
| 317 | 5 | 451 | 137 | 3 | 596 | 0.01 | 0.76 | 0.23 | 0.01 | T | 19 | 0.76 |
| 318 | 420 | 296 | 23 | 51 | 790 | 0.53 | 0.37 | 0.03 | 0.06 | A | 19 | 0.53 |
| 319 | 388 | 116 | 93 | 28 | 625 | 0.62 | 0.19 | 0.15 | 0.04 | A | 18 | 0.62 |
| 320 | 23 | 436 | 47 | 14 | 520 | 0.04 | 0.84 | 0.09 | 0.03 | T | 18 | 0.84 |
| 321 | 0 | 325 | 84 | 184 | 593 | 0.00 | 0.55 | 0.14 | 0.31 | T | 16 | 0.55 |
| 322 | 426 | 304 | 152 | 6 | 888 | 0.48 | 0.34 | 0.17 | 0.01 | A | 19 | 0.48 |
| 323 | 96 | 105 | 31 | 289 | 521 | 0.18 | 0.20 | 0.06 | 0.55 | C | 11 | 0.55 |
| 324 | 147 | 485 | 80 | 0 | 712 | 0.21 | 0.68 | 0.11 | 0.00 | T | 18 | 0.68 |
| 325 | 279 | 242 | 56 | 155 | 732 | 0.38 | 0.33 | 0.08 | 0.21 | A | 8 | 0.38 |
| 326 | 394 | 364 | 75 | 30 | 863 | 0.46 | 0.42 | 0.09 | 0.03 | A | 11 | 0.46 |
| 327 | 127 | 22 | 167 | 292 | 608 | 0.21 | 0.04 | 0.27 | 0.48 | C | 10 | 0.48 |
| 328 | 0 | 333 | 0 | 296 | 629 | 0.00 | 0.53 | 0.00 | 0.47 | T | 13 | 0.53 |
| 329 | 0 | 253 | 241 | 349 | 843 | 0.00 | 0.30 | 0.29 | 0.41 | C | 15 | 0.41 |
| 330 | 2 | 447 | 0 | 82 | 531 | 0.00 | 0.84 | 0.00 | 0.15 | T | 18 | 0.84 |
| 331 | 417 | 51 | 11 | 181 | 660 | 0.63 | 0.08 | 0.02 | 0.27 | A | 24 | 0.63 |
| 332 | 147 | 425 | 15 | 4 | 591 | 0.25 | 0.72 | 0.03 | 0.01 | T | 23 | 0.72 |
| 333 | 0 | 24 | 257 | 380 | 661 | 0.00 | 0.04 | 0.39 | 0.57 | C | 18 | 0.57 |
| 334 | 239 | 18 | 0 | 445 | 702 | 0.34 | 0.03 | 0.00 | 0.63 | C | 24 | 0.63 |
| 335 | 0 | 0 | 154 | 491 | 645 | 0.00 | 0.00 | 0.24 | 0.76 | C | 23 | 0.76 |
| 336 | 278 | 36 | 61 | 550 | 925 | 0.30 | 0.04 | 0.07 | 0.59 | C | 27 | 0.59 |
| 337 | 182 | 174 | 226 | 68 | 650 | 0.28 | 0.27 | 0.35 | 0.10 | N | 11 | 0.35 |
| 338 | 174 | 347 | 62 | 49 | 632 | 0.28 | 0.55 | 0.10 | 0.08 | T | 13 | 0.55 |
| 339 | 7 | 344 | 75 | 384 | 810 | 0.01 | 0.42 | 0.09 | 0.47 | C | 12 | 0.47 |
| 340 | 225 | 0 | 0 | 178 | 403 | 0.56 | 0.00 | 0.00 | 0.44 | A | 12 | 0.56 |
| 341 | 60 | 244 | 23 | 277 | 604 | 0.10 | 0.40 | 0.04 | 0.46 | C | 9 | 0.46 |
| 342 | 117 | 358 | 0 | 0 | 475 | 0.25 | 0.75 | 0.00 | 0.00 | T | 10 | 0.75 |
| 343 | 366 | 0 | 340 | 133 | 839 | 0.44 | 0.00 | 0.41 | 0.16 | A | 12 | 0.44 |
| 344 | 15 | 460 | 155 | 0 | 630 | 0.02 | 0.73 | 0.25 | 0.00 | T | 17 | 0.73 |
| 345 | 0 | 321 | 198 | 87 | 606 | 0.00 | 0.53 | 0.33 | 0.14 | T | 13 | 0.53 |
| 346 | 528 | 153 | 0 | 17 | 698 | 0.76 | 0.22 | 0.00 | 0.02 | A | 28 | 0.76 |
| 347 | 321 | 56 | 56 | 244 | 677 | 0.47 | 0.08 | 0.08 | 0.36 | A | 17 | 0.47 |
| 348 | 213 | 4 | 123 | 0 | 340 | 0.63 | 0.01 | 0.36 | 0.00 | A | 8 | 0.63 |
| 349 | 157 | 267 | 0 | 55 | 479 | 0.33 | 0.56 | 0.00 | 0.11 | T | 13 | 0.56 |
| 350 | 0 | 544 | 8 | 102 | 654 | 0.00 | 0.83 | 0.01 | 0.16 | T | 28 | 0.83 |
| 351 | 230 | 0 | 204 | 47 | 481 | 0.48 | 0.00 | 0.42 | 0.10 | A | 13 | 0.48 |
| 352 | 0 | 287 | 145 | 344 | 776 | 0.00 | 0.37 | 0.19 | 0.44 | C | 16 | 0.44 |
| 353 | 23 | 258 | 283 | 0 | 564 | 0.04 | 0.46 | 0.50 | 0.00 | G | 10 | 0.50 |
| 354 | 129 | 0 | 537 | 14 | 680 | 0.19 | 0.00 | 0.79 | 0.02 | G | 28 | 0.79 |
| 355 | 581 | 26 | 166 | 11 | 784 | 0.74 | 0.03 | 0.21 | 0.01 | A | 23 | 0.74 |
| 356 | 209 | 0 | 433 | 7 | 649 | 0.32 | 0.00 | 0.67 | 0.01 | G | 16 | 0.67 |
| 357 | 201 | 376 | 0 | 20 | 597 | 0.34 | 0.63 | 0.00 | 0.03 | T | 19 | 0.63 |
| 358 | 41 | 391 | 289 | 0 | 721 | 0.06 | 0.54 | 0.40 | 0.00 | T | 19 | 0.54 |
| 359 | 145 | 204 | 23 | 246 | 618 | 0.23 | 0.33 | 0.04 | 0.40 | C | 8 | 0.40 |
| 360 | 298 | 204 | 205 | 44 | 751 | 0.40 | 0.27 | 0.27 | 0.06 | A | 13 | 0.40 |
| 361 | 279 | 0 | 0 | 543 | 822 | 0.34 | 0.00 | 0.00 | 0.66 | C | 24 | 0.66 |
| 362 | 0 | 63 | 245 | 250 | 558 | 0.00 | 0.11 | 0.44 | 0.45 | C | 13 | 0.45 |
| 363 | 132 | 51 | 135 | 273 | 591 | 0.22 | 0.09 | 0.23 | 0.46 | C | 13 | 0.46 |
| 364 | 66 | 1 | 537 | 180 | 784 | 0.08 | 0.00 | 0.68 | 0.23 | G | 23 | 0.68 |
| 365 | 0 | 9 | 302 | 308 | 619 | 0.00 | 0.01 | 0.49 | 0.50 | C | 13 | 0.50 |
| 366 | 126 | 143 | 256 | 39 | 564 | 0.22 | 0.25 | 0.45 | 0.07 | G | 13 | 0.45 |
| 367 | 301 | 18 | 0 | 232 | 551 | 0.55 | 0.03 | 0.00 | 0.42 | A | 13 | 0.55 |
| 368 | 10 | 2 | 208 | 473 | 693 | 0.01 | 0.00 | 0.30 | 0.68 | C | 28 | 0.68 |
| 369 | 3 | 271 | 244 | 125 | 643 | 0.00 | 0.42 | 0.38 | 0.19 | T | 13 | 0.42 |
| 370 | 230 | 281 | 65 | 39 | 615 | 0.37 | 0.46 | 0.11 | 0.06 | T | 13 | 0.46 |
| 371 | 156 | 402 | 32 | 26 | 616 | 0.25 | 0.65 | 0.05 | 0.04 | T | 18 | 0.65 |
| 372 | 23 | 0 | 298 | 339 | 660 | 0.03 | 0.00 | 0.45 | 0.51 | C | 18 | 0.51 |
| 373 | 41 | 322 | 312 | 8 | 683 | 0.06 | 0.47 | 0.46 | 0.01 | T | 13 | 0.47 |
| 374 | 250 | 0 | 320 | 19 | 589 | 0.42 | 0.00 | 0.54 | 0.03 | G | 12 | 0.54 |
| 375 | 2 | 442 | 42 | 0 | 486 | 0.00 | 0.91 | 0.09 | 0.00 | T | 18 | 0.91 |
| 376 | 16 | 162 | 2 | 409 | 589 | 0.03 | 0.28 | 0.00 | 0.69 | C | 23 | 0.69 |
| 377 | 240 | 365 | 41 | 3 | 649 | 0.37 | 0.56 | 0.06 | 0.00 | T | 18 | 0.56 |
| 378 | 340 | 32 | 16 | 230 | 618 | 0.55 | 0.05 | 0.03 | 0.37 | A | 18 | 0.55 |
| 379 | 102 | 46 | 266 | 243 | 657 | 0.16 | 0.07 | 0.40 | 0.37 | G | 14 | 0.40 |
| 380 | 65 | 146 | 495 | 119 | 825 | 0.08 | 0.18 | 0.60 | 0.14 | G | 30 | 0.60 |
| 381 | 3 | 156 | 448 | 0 | 607 | 0.00 | 0.26 | 0.74 | 0.00 | G | 24 | 0.74 |
| 382 | 155 | 229 | 170 | 40 | 594 | 0.26 | 0.39 | 0.29 | 0.07 | T | 19 | 0.39 |
| 383 | 192 | 3 | 555 | 19 | 769 | 0.25 | 0.00 | 0.72 | 0.02 | G | 30 | 0.72 |
| 384 | 0 | 224 | 0 | 189 | 413 | 0.00 | 0.54 | 0.00 | 0.46 | T | 13 | 0.54 |
| 385 | 58 | 237 | 547 | 44 | 886 | 0.07 | 0.27 | 0.62 | 0.05 | G | 18 | 0.62 |
| 386 | 476 | 389 | 11 | 5 | 881 | 0.54 | 0.44 | 0.01 | 0.01 | A | 17 | 0.54 |
| 387 | 5 | 19 | 552 | 146 | 722 | 0.01 | 0.03 | 0.76 | 0.20 | G | 19 | 0.76 |
| 388 | 34 | 183 | 101 | 263 | 581 | 0.06 | 0.31 | 0.17 | 0.45 | C | 14 | 0.45 |
| 389 | 4 | 279 | 119 | 122 | 524 | 0.01 | 0.53 | 0.23 | 0.23 | T | 11 | 0.53 |
| 390 | 338 | 10 | 25 | 286 | 659 | 0.51 | 0.02 | 0.04 | 0.43 | A | 11 | 0.51 |
| 391 | 0 | 3 | 343 | 146 | 492 | 0.00 | 0.01 | 0.70 | 0.30 | G | 18 | 0.70 |
| 392 | 294 | 163 | 0 | 6 | 463 | 0.63 | 0.35 | 0.00 | 0.01 | A | 16 | 0.63 |
| 393 | 158 | 239 | 151 | 0 | 548 | 0.29 | 0.44 | 0.28 | 0.00 | T | 23 | 0.44 |
| 394 | 16 | 73 | 311 | 201 | 601 | 0.03 | 0.12 | 0.52 | 0.33 | G | 24 | 0.52 |
| 395 | 489 | 136 | 6 | 26 | 657 | 0.74 | 0.21 | 0.01 | 0.04 | A | 34 | 0.74 |
| 396 | 462 | 2 | 100 | 1 | 565 | 0.82 | 0.00 | 0.18 | 0.00 | A | 34 | 0.82 |
| 397 | 149 | 198 | 59 | 2 | 408 | 0.37 | 0.49 | 0.14 | 0.00 | T | 12 | 0.49 |
| 398 | 187 | 260 | 174 | 57 | 678 | 0.28 | 0.38 | 0.26 | 0.08 | T | 18 | 0.38 |
| 399 | 47 | 184 | 84 | 309 | 624 | 0.08 | 0.29 | 0.13 | 0.50 | C | 24 | 0.50 |
| 400 | 440 | 0 | 0 | 18 | 458 | 0.96 | 0.00 | 0.00 | 0.04 | A | 30 | 0.96 |
| 401 | 0 | 498 | 92 | 21 | 611 | 0.00 | 0.82 | 0.15 | 0.03 | T | 34 | 0.82 |
| 402 | 41 | 0 | 194 | 419 | 654 | 0.06 | 0.00 | 0.30 | 0.64 | C | 25 | 0.64 |
| 403 | 371 | 40 | 106 | 0 | 517 | 0.72 | 0.08 | 0.21 | 0.00 | A | 18 | 0.72 |
| 404 | 174 | 46 | 153 | 0 | 373 | 0.47 | 0.12 | 0.41 | 0.00 | A | 11 | 0.47 |
| 405 | 0 | 455 | 0 | 88 | 543 | 0.00 | 0.84 | 0.00 | 0.16 | T | 23 | 0.84 |
| 406 | 262 | 121 | 514 | 0 | 897 | 0.29 | 0.13 | 0.57 | 0.00 | G | 30 | 0.57 |
| 407 | 4 | 141 | 3 | 444 | 592 | 0.01 | 0.24 | 0.01 | 0.75 | C | 24 | 0.75 |
| 408 | 257 | 93 | 63 | 140 | 553 | 0.46 | 0.17 | 0.11 | 0.25 | A | 13 | 0.46 |
| 409 | 323 | 0 | 179 | 36 | 538 | 0.60 | 0.00 | 0.33 | 0.07 | A | 13 | 0.60 |
| 410 | 61 | 245 | 0 | 238 | 544 | 0.11 | 0.45 | 0.00 | 0.44 | T | 13 | 0.45 |
| 411 | 260 | 17 | 496 | 0 | 773 | 0.34 | 0.02 | 0.64 | 0.00 | G | 23 | 0.64 |
| 412 | 0 | 0 | 91 | 432 | 523 | 0.00 | 0.00 | 0.17 | 0.83 | C | 19 | 0.83 |
| 413 | 284 | 11 | 311 | 0 | 606 | 0.47 | 0.02 | 0.51 | 0.00 | G | 15 | 0.51 |
| 414 | 0 | 59 | 55 | 207 | 321 | 0.00 | 0.18 | 0.17 | 0.64 | C | 13 | 0.64 |
| 415 | 0 | 39 | 702 | 3 | 744 | 0.00 | 0.05 | 0.94 | 0.00 | G | 34 | 0.94 |
| 416 | 23 | 400 | 0 | 57 | 480 | 0.05 | 0.83 | 0.00 | 0.12 | T | 18 | 0.83 |
| 417 | 211 | 31 | 424 | 28 | 694 | 0.30 | 0.04 | 0.61 | 0.04 | G | 30 | 0.61 |
| 418 | 212 | 0 | 147 | 198 | 557 | 0.38 | 0.00 | 0.26 | 0.36 | A | 13 | 0.38 |
| 419 | 44 | 190 | 275 | 0 | 509 | 0.09 | 0.37 | 0.54 | 0.00 | G | 12 | 0.54 |
| 420 | 29 | 2 | 228 | 429 | 688 | 0.04 | 0.00 | 0.33 | 0.62 | C | 24 | 0.62 |
| 421 | 14 | 266 | 3 | 160 | 443 | 0.03 | 0.60 | 0.01 | 0.36 | T | 12 | 0.60 |
| 422 | 38 | 254 | 247 | 284 | 823 | 0.05 | 0.31 | 0.30 | 0.35 | C | 13 | 0.35 |
| 423 | 0 | 265 | 4 | 292 | 561 | 0.00 | 0.47 | 0.01 | 0.52 | C | 13 | 0.52 |
| 424 | 413 | 32 | 71 | 35 | 551 | 0.75 | 0.06 | 0.13 | 0.06 | A | 23 | 0.75 |
| 425 | 214 | 226 | 117 | 29 | 586 | 0.37 | 0.39 | 0.20 | 0.05 | T | 10 | 0.39 |
| 426 | 358 | 233 | 87 | 1 | 679 | 0.53 | 0.34 | 0.13 | 0.00 | A | 12 | 0.53 |
| 427 | 360 | 295 | 39 | 3 | 697 | 0.52 | 0.42 | 0.06 | 0.00 | A | 13 | 0.52 |
| 428 | 0 | 2 | 0 | 261 | 263 | 0.00 | 0.01 | 0.00 | 0.99 | C | 14 | 0.99 |
| 429 | 196 | 192 | 84 | 21 | 493 | 0.40 | 0.39 | 0.17 | 0.04 | A | 15 | 0.40 |
| 430 | 5 | 468 | 131 | 4 | 608 | 0.01 | 0.77 | 0.22 | 0.01 | T | 17 | 0.77 |
| 431 | 0 | 296 | 0 | 289 | 585 | 0.00 | 0.51 | 0.00 | 0.49 | T | 10 | 0.51 |
| 432 | 233 | 203 | 75 | 6 | 517 | 0.45 | 0.39 | 0.15 | 0.01 | A | 11 | 0.45 |
| 433 | 243 | 0 | 30 | 230 | 503 | 0.48 | 0.00 | 0.06 | 0.46 | A | 14 | 0.48 |
| 434 | 219 | 172 | 84 | 116 | 591 | 0.37 | 0.29 | 0.14 | 0.20 | N | 13 | 0.37 |
| 435 | 285 | 2 | 164 | 0 | 451 | 0.63 | 0.00 | 0.36 | 0.00 | A | 12 | 0.63 |
| 436 | 80 | 2 | 448 | 221 | 751 | 0.11 | 0.00 | 0.60 | 0.29 | G | 24 | 0.60 |
| 437 | 48 | 187 | 186 | 103 | 524 | 0.09 | 0.36 | 0.35 | 0.20 | N | 11 | 0.36 |
| 438 | 95 | 302 | 31 | 138 | 566 | 0.17 | 0.53 | 0.05 | 0.24 | T | 16 | 0.53 |
| 439 | 192 | 100 | 32 | 238 | 562 | 0.34 | 0.18 | 0.06 | 0.42 | C | 11 | 0.42 |
| 440 | 105 | 175 | 54 | 131 | 465 | 0.23 | 0.38 | 0.12 | 0.28 | N | 9 | 0.38 |
| 441 | 0 | 0 | 58 | 287 | 345 | 0.00 | 0.00 | 0.17 | 0.83 | C | 14 | 0.83 |
| 442 | 232 | 252 | 58 | 1 | 543 | 0.43 | 0.46 | 0.11 | 0.00 | T | 11 | 0.46 |
| 443 | 139 | 330 | 105 | 186 | 760 | 0.18 | 0.43 | 0.14 | 0.24 | N | 16 | 0.43 |
| 444 | 187 | 2 | 118 | 193 | 500 | 0.37 | 0.00 | 0.24 | 0.39 | C | 11 | 0.39 |
| 445 | 110 | 5 | 290 | 2 | 407 | 0.27 | 0.01 | 0.71 | 0.00 | G | 17 | 0.71 |
| 446 | 424 | 102 | 101 | 2 | 629 | 0.67 | 0.16 | 0.16 | 0.00 | A | 26 | 0.67 |
| 447 | 191 | 356 | 0 | 199 | 746 | 0.26 | 0.48 | 0.00 | 0.27 | T | 22 | 0.48 |
| 448 | 70 | 334 | 59 | 169 | 632 | 0.11 | 0.53 | 0.09 | 0.27 | T | 11 | 0.53 |
| 449 | 43 | 478 | 227 | 0 | 748 | 0.06 | 0.64 | 0.30 | 0.00 | T | 16 | 0.64 |
| 450 | 2 | 0 | 449 | 336 | 787 | 0.00 | 0.00 | 0.57 | 0.43 | G | 16 | 0.57 |
| 451 | 175 | 172 | 3 | 0 | 350 | 0.50 | 0.49 | 0.01 | 0.00 | A | 11 | 0.50 |
| 452 | 0 | 195 | 68 | 3 | 266 | 0.00 | 0.73 | 0.26 | 0.01 | T | 11 | 0.73 |
| 453 | 286 | 4 | 40 | 212 | 542 | 0.53 | 0.01 | 0.07 | 0.39 | A | 11 | 0.53 |
| 454 | 224 | 220 | 41 | 0 | 485 | 0.46 | 0.45 | 0.08 | 0.00 | A | 11 | 0.46 |
| 455 | 0 | 183 | 161 | 22 | 366 | 0.00 | 0.50 | 0.44 | 0.06 | T | 11 | 0.50 |
| 456 | 84 | 3 | 674 | 130 | 891 | 0.09 | 0.00 | 0.76 | 0.15 | G | 38 | 0.76 |
| 457 | 13 | 164 | 0 | 252 | 429 | 0.03 | 0.38 | 0.00 | 0.59 | C | 10 | 0.59 |
| 458 | 23 | 280 | 103 | 219 | 625 | 0.04 | 0.45 | 0.16 | 0.35 | T | 10 | 0.45 |
| 459 | 1 | 476 | 74 | 0 | 551 | 0.00 | 0.86 | 0.13 | 0.00 | T | 22 | 0.86 |
| 460 | 2 | 0 | 265 | 267 | 534 | 0.00 | 0.00 | 0.50 | 0.50 | C | 11 | 0.50 |
| 461 | 256 | 63 | 0 | 133 | 452 | 0.57 | 0.14 | 0.00 | 0.29 | A | 10 | 0.57 |
| 462 | 253 | 13 | 17 | 1 | 284 | 0.89 | 0.05 | 0.06 | 0.00 | A | 9 | 0.89 |
| 463 | 438 | 0 | 3 | 0 | 441 | 0.99 | 0.00 | 0.01 | 0.00 | A | 22 | 0.99 |
| 464 | 104 | 35 | 201 | 188 | 528 | 0.20 | 0.07 | 0.38 | 0.36 | G | 14 | 0.38 |
| 465 | 57 | 341 | 0 | 103 | 501 | 0.11 | 0.68 | 0.00 | 0.21 | T | 29 | 0.68 |
| 466 | 111 | 335 | 2 | 0 | 448 | 0.25 | 0.75 | 0.00 | 0.00 | T | 22 | 0.75 |
| 467 | 114 | 240 | 0 | 205 | 559 | 0.20 | 0.43 | 0.00 | 0.37 | T | 14 | 0.43 |
| 468 | 0 | 307 | 57 | 258 | 622 | 0.00 | 0.49 | 0.09 | 0.41 | T | 11 | 0.49 |
| 469 | 127 | 237 | 140 | 91 | 595 | 0.21 | 0.40 | 0.24 | 0.15 | N | 11 | 0.40 |
| 470 | 5 | 406 | 0 | 111 | 522 | 0.01 | 0.78 | 0.00 | 0.21 | T | 20 | 0.78 |
| 471 | 256 | 266 | 48 | 3 | 573 | 0.45 | 0.46 | 0.08 | 0.01 | T | 10 | 0.46 |
| 472 | 0 | 2 | 0 | 253 | 255 | 0.00 | 0.01 | 0.00 | 0.99 | C | 12 | 0.99 |
| 473 | 3 | 292 | 228 | 2 | 525 | 0.01 | 0.56 | 0.43 | 0.00 | T | 16 | 0.56 |
| 474 | 75 | 142 | 277 | 128 | 622 | 0.12 | 0.23 | 0.45 | 0.21 | N | 14 | 0.45 |
| 475 | 4 | 366 | 81 | 102 | 553 | 0.01 | 0.66 | 0.15 | 0.18 | T | 15 | 0.66 |
| 476 | 156 | 224 | 0 | 82 | 462 | 0.34 | 0.48 | 0.00 | 0.18 | T | 11 | 0.48 |
| 477 | 226 | 263 | 33 | 19 | 541 | 0.42 | 0.49 | 0.06 | 0.04 | T | 10 | 0.49 |
| 478 | 243 | 252 | 60 | 0 | 555 | 0.44 | 0.45 | 0.11 | 0.00 | T | 6 | 0.45 |
| 479 | 2 | 344 | 0 | 161 | 507 | 0.00 | 0.68 | 0.00 | 0.32 | T | 14 | 0.68 |
| 480 | 265 | 0 | 0 | 0 | 265 | 1.00 | 0.00 | 0.00 | 0.00 | A | 11 | 1.00 |
| 481 | 0 | 68 | 32 | 389 | 489 | 0.00 | 0.14 | 0.07 | 0.80 | C | 12 | 0.80 |
| 482 | 196 | 32 | 89 | 122 | 439 | 0.45 | 0.07 | 0.20 | 0.28 | A | 10 | 0.45 |
| 483 | 191 | 0 | 148 | 1 | 340 | 0.56 | 0.00 | 0.44 | 0.00 | A | 8 | 0.56 |
| 484 | 159 | 281 | 0 | 0 | 440 | 0.36 | 0.64 | 0.00 | 0.00 | T | 8 | 0.64 |
| 485 | 2 | 191 | 282 | 0 | 475 | 0.00 | 0.40 | 0.59 | 0.00 | G | 11 | 0.59 |
| 486 | 263 | 0 | 117 | 149 | 529 | 0.50 | 0.00 | 0.22 | 0.28 | A | 12 | 0.50 |
| 487 | 92 | 1 | 240 | 128 | 461 | 0.20 | 0.00 | 0.52 | 0.28 | G | 13 | 0.52 |
| 488 | 1 | 286 | 134 | 0 | 421 | 0.00 | 0.68 | 0.32 | 0.00 | T | 24 | 0.68 |
| 489 | 0 | 0 | 65 | 286 | 351 | 0.00 | 0.00 | 0.19 | 0.81 | C | 15 | 0.81 |
| 490 | 164 | 0 | 3 | 326 | 493 | 0.33 | 0.00 | 0.01 | 0.66 | C | 11 | 0.66 |
| 491 | 18 | 0 | 118 | 340 | 476 | 0.04 | 0.00 | 0.25 | 0.71 | C | 23 | 0.71 |
| 492 | 227 | 324 | 65 | 57 | 673 | 0.34 | 0.48 | 0.10 | 0.08 | T | 16 | 0.48 |
| 493 | 0 | 16 | 211 | 374 | 601 | 0.00 | 0.03 | 0.35 | 0.62 | C | 22 | 0.62 |
| 494 | 109 | 262 | 0 | 0 | 371 | 0.29 | 0.71 | 0.00 | 0.00 | T | 14 | 0.71 |
| 495 | 319 | 0 | 26 | 145 | 490 | 0.65 | 0.00 | 0.05 | 0.30 | A | 11 | 0.65 |
| 496 | 0 | 43 | 92 | 124 | 259 | 0.00 | 0.17 | 0.36 | 0.48 | C | 15 | 0.48 |
| 497 | 103 | 0 | 117 | 117 | 337 | 0.31 | 0.00 | 0.35 | 0.35 | C | 10 | 0.35 |
| 498 | 358 | 251 | 42 | 52 | 703 | 0.51 | 0.36 | 0.06 | 0.07 | A | 14 | 0.51 |
| 499 | 297 | 0 | 106 | 19 | 422 | 0.70 | 0.00 | 0.25 | 0.05 | A | 11 | 0.70 |
| 500 | 91 | 246 | 106 | 154 | 597 | 0.15 | 0.41 | 0.18 | 0.26 | N | 12 | 0.41 |
| 501 | 0 | 116 | 136 | 219 | 471 | 0.00 | 0.25 | 0.29 | 0.46 | C | 12 | 0.46 |
| 502 | 286 | 1 | 192 | 0 | 479 | 0.60 | 0.00 | 0.40 | 0.00 | A | 14 | 0.60 |
| 503 | 100 | 14 | 319 | 83 | 516 | 0.19 | 0.03 | 0.62 | 0.16 | G | 17 | 0.62 |
| 504 | 18 | 0 | 0 | 188 | 206 | 0.09 | 0.00 | 0.00 | 0.91 | C | 9 | 0.91 |
| 505 | 68 | 121 | 32 | 307 | 528 | 0.13 | 0.23 | 0.06 | 0.58 | C | 14 | 0.58 |
| 506 | 246 | 0 | 1 | 0 | 247 | 1.00 | 0.00 | 0.00 | 0.00 | A | 11 | 1.00 |
| 507 | 0 | 105 | 43 | 282 | 430 | 0.00 | 0.24 | 0.10 | 0.66 | C | 11 | 0.66 |
| 508 | 235 | 1 | 197 | 4 | 437 | 0.54 | 0.00 | 0.45 | 0.01 | A | 11 | 0.54 |
| 509 | 0 | 5 | 168 | 119 | 292 | 0.00 | 0.02 | 0.58 | 0.41 | G | 11 | 0.58 |
| 510 | 303 | 2 | 48 | 242 | 595 | 0.51 | 0.00 | 0.08 | 0.41 | A | 10 | 0.51 |
| 511 | 226 | 0 | 120 | 1 | 347 | 0.65 | 0.00 | 0.35 | 0.00 | A | 11 | 0.65 |
| 512 | 0 | 201 | 165 | 0 | 366 | 0.00 | 0.55 | 0.45 | 0.00 | T | 12 | 0.55 |
| 513 | 283 | 0 | 103 | 17 | 403 | 0.70 | 0.00 | 0.26 | 0.04 | A | 20 | 0.70 |
| 514 | 146 | 177 | 1 | 118 | 442 | 0.33 | 0.40 | 0.00 | 0.27 | T | 10 | 0.40 |
| 515 | 187 | 160 | 1 | 0 | 348 | 0.54 | 0.46 | 0.00 | 0.00 | A | 12 | 0.54 |
| 516 | 185 | 0 | 161 | 150 | 496 | 0.37 | 0.00 | 0.32 | 0.30 | A | 13 | 0.37 |
| 517 | 38 | 337 | 3 | 0 | 378 | 0.10 | 0.89 | 0.01 | 0.00 | T | 21 | 0.89 |
| 518 | 2 | 500 | 2 | 109 | 613 | 0.00 | 0.82 | 0.00 | 0.18 | T | 32 | 0.82 |
| 519 | 91 | 0 | 285 | 220 | 596 | 0.15 | 0.00 | 0.48 | 0.37 | G | 15 | 0.48 |
| 520 | 0 | 42 | 79 | 304 | 425 | 0.00 | 0.10 | 0.19 | 0.72 | C | 13 | 0.72 |
| 521 | 276 | 14 | 0 | 141 | 431 | 0.64 | 0.03 | 0.00 | 0.33 | A | 10 | 0.64 |
| 522 | 48 | 15 | 264 | 196 | 523 | 0.09 | 0.03 | 0.50 | 0.37 | G | 11 | 0.50 |
| 523 | 30 | 241 | 266 | 0 | 537 | 0.06 | 0.45 | 0.50 | 0.00 | G | 10 | 0.50 |
| 524 | 0 | 334 | 0 | 111 | 445 | 0.00 | 0.75 | 0.00 | 0.25 | T | 14 | 0.75 |
| 525 | 47 | 0 | 459 | 118 | 624 | 0.08 | 0.00 | 0.74 | 0.19 | G | 21 | 0.74 |
| 526 | 304 | 0 | 285 | 0 | 589 | 0.52 | 0.00 | 0.48 | 0.00 | A | 15 | 0.52 |
| 527 | 45 | 157 | 169 | 214 | 585 | 0.08 | 0.27 | 0.29 | 0.37 | C | 11 | 0.37 |
| 528 | 4 | 248 | 0 | 184 | 436 | 0.01 | 0.57 | 0.00 | 0.42 | T | 12 | 0.57 |
| 529 | 259 | 0 | 187 | 0 | 446 | 0.58 | 0.00 | 0.42 | 0.00 | A | 13 | 0.58 |
| 530 | 0 | 229 | 2 | 107 | 338 | 0.00 | 0.68 | 0.01 | 0.32 | T | 13 | 0.68 |
| 531 | 1 | 321 | 16 | 0 | 338 | 0.00 | 0.95 | 0.05 | 0.00 | T | 15 | 0.95 |
| 532 | 8 | 280 | 6 | 218 | 512 | 0.02 | 0.55 | 0.01 | 0.43 | T | 11 | 0.55 |
| 533 | 168 | 41 | 164 | 218 | 591 | 0.28 | 0.07 | 0.28 | 0.37 | C | 12 | 0.37 |
| 534 | 0 | 1 | 188 | 0 | 189 | 0.00 | 0.01 | 0.99 | 0.00 | G | 17 | 0.99 |
| 535 | 113 | 123 | 0 | 161 | 397 | 0.28 | 0.31 | 0.00 | 0.41 | C | 15 | 0.41 |
| 536 | 335 | 0 | 14 | 200 | 549 | 0.61 | 0.00 | 0.03 | 0.36 | A | 20 | 0.61 |
| 537 | 130 | 73 | 94 | 0 | 297 | 0.44 | 0.25 | 0.32 | 0.00 | A | 11 | 0.44 |
| 538 | 116 | 0 | 399 | 9 | 524 | 0.22 | 0.00 | 0.76 | 0.02 | G | 27 | 0.76 |
| 539 | 109 | 195 | 0 | 166 | 470 | 0.23 | 0.41 | 0.00 | 0.35 | T | 11 | 0.41 |
| 540 | 123 | 142 | 149 | 0 | 414 | 0.30 | 0.34 | 0.36 | 0.00 | G | 13 | 0.36 |
| 541 | 177 | 30 | 220 | 156 | 583 | 0.30 | 0.05 | 0.38 | 0.27 | G | 17 | 0.38 |
| 542 | 479 | 5 | 0 | 0 | 484 | 0.99 | 0.01 | 0.00 | 0.00 | A | 33 | 0.99 |
| 543 | 0 | 34 | 228 | 102 | 364 | 0.00 | 0.09 | 0.63 | 0.28 | G | 15 | 0.63 |
| 544 | 91 | 0 | 256 | 108 | 455 | 0.20 | 0.00 | 0.56 | 0.24 | G | 17 | 0.56 |
| 545 | 127 | 329 | 0 | 1 | 457 | 0.28 | 0.72 | 0.00 | 0.00 | T | 18 | 0.72 |
| 546 | 14 | 0 | 159 | 208 | 381 | 0.04 | 0.00 | 0.42 | 0.55 | C | 12 | 0.55 |
| 547 | 1 | 356 | 74 | 0 | 431 | 0.00 | 0.83 | 0.17 | 0.00 | T | 20 | 0.83 |
| 548 | 0 | 0 | 0 | 192 | 192 | 0.00 | 0.00 | 0.00 | 1.00 | C | 10 | 1.00 |
| 549 | 170 | 223 | 172 | 2 | 567 | 0.30 | 0.39 | 0.30 | 0.00 | T | 11 | 0.39 |
| 550 | 0 | 107 | 167 | 25 | 299 | 0.00 | 0.36 | 0.56 | 0.08 | G | 11 | 0.56 |
| 551 | 88 | 370 | 9 | 0 | 467 | 0.19 | 0.79 | 0.02 | 0.00 | T | 18 | 0.79 |
| 552 | 0 | 0 | 0 | 415 | 415 | 0.00 | 0.00 | 0.00 | 1.00 | C | 23 | 1.00 |
| 553 | 4 | 0 | 0 | 0 | 4 | 1.00 | 0.00 | 0.00 | 0.00 | A | 25 | 1.00 |
| 554 | 76 | 0 | 204 | 0 | 280 | 0.27 | 0.00 | 0.73 | 0.00 | G | 11 | 0.73 |
| 555 | 26 | 368 | 16 | 118 | 528 | 0.05 | 0.70 | 0.03 | 0.22 | T | 16 | 0.70 |
| 556 | 0 | 0 | 132 | 8 | 140 | 0.00 | 0.00 | 0.94 | 0.06 | G | 9 | 0.94 |
| 557 | 343 | 152 | 29 | 18 | 542 | 0.63 | 0.28 | 0.05 | 0.03 | A | 12 | 0.63 |
| 558 | 0 | 19 | 22 | 202 | 243 | 0.00 | 0.08 | 0.09 | 0.83 | C | 9 | 0.83 |
| 559 | 93 | 1 | 144 | 232 | 470 | 0.20 | 0.00 | 0.31 | 0.49 | C | 9 | 0.49 |
| 560 | 17 | 202 | 201 | 0 | 420 | 0.04 | 0.48 | 0.48 | 0.00 | T | 8 | 0.48 |
| 561 | 364 | 0 | 4 | 248 | 616 | 0.59 | 0.00 | 0.01 | 0.40 | A | 14 | 0.59 |
| 562 | 0 | 150 | 46 | 45 | 241 | 0.00 | 0.62 | 0.19 | 0.19 | T | 8 | 0.62 |
| 563 | 0 | 0 | 164 | 134 | 298 | 0.00 | 0.00 | 0.55 | 0.45 | G | 9 | 0.55 |
| 564 | 279 | 192 | 155 | 0 | 626 | 0.45 | 0.31 | 0.25 | 0.00 | A | 11 | 0.45 |
| 565 | 0 | 196 | 0 | 34 | 230 | 0.00 | 0.85 | 0.00 | 0.15 | T | 10 | 0.85 |
| 566 | 147 | 215 | 41 | 61 | 464 | 0.32 | 0.46 | 0.09 | 0.13 | T | 10 | 0.46 |
| 567 | 228 | 0 | 51 | 190 | 469 | 0.49 | 0.00 | 0.11 | 0.41 | A | 10 | 0.49 |
| 568 | 192 | 1 | 21 | 201 | 415 | 0.46 | 0.00 | 0.05 | 0.48 | C | 10 | 0.48 |
| 569 | 149 | 201 | 5 | 0 | 355 | 0.42 | 0.57 | 0.01 | 0.00 | T | 10 | 0.57 |
| 570 | 0 | 325 | 78 | 36 | 439 | 0.00 | 0.74 | 0.18 | 0.08 | T | 18 | 0.74 |
| 571 | 499 | 0 | 0 | 13 | 512 | 0.97 | 0.00 | 0.00 | 0.03 | A | 31 | 0.97 |
| 572 | 0 | 147 | 0 | 141 | 288 | 0.00 | 0.51 | 0.00 | 0.49 | T | 15 | 0.51 |
| 573 | 187 | 0 | 0 | 103 | 290 | 0.64 | 0.00 | 0.00 | 0.36 | A | 11 | 0.64 |
| 574 | 0 | 0 | 198 | 8 | 206 | 0.00 | 0.00 | 0.96 | 0.04 | G | 10 | 0.96 |
| 575 | 272 | 0 | 134 | 8 | 414 | 0.66 | 0.00 | 0.32 | 0.02 | A | 19 | 0.66 |
| 576 | 81 | 304 | 168 | 1 | 554 | 0.15 | 0.55 | 0.30 | 0.00 | T | 19 | 0.55 |
| 577 | 6 | 240 | 3 | 236 | 485 | 0.01 | 0.49 | 0.01 | 0.49 | T | 16 | 0.49 |
| 578 | 196 | 245 | 1 | 0 | 442 | 0.44 | 0.55 | 0.00 | 0.00 | T | 11 | 0.55 |
| 579 | 100 | 0 | 10 | 312 | 422 | 0.24 | 0.00 | 0.02 | 0.74 | C | 14 | 0.74 |
| 580 | 62 | 176 | 43 | 0 | 281 | 0.22 | 0.63 | 0.15 | 0.00 | T | 8 | 0.63 |
| 581 | 0 | 225 | 40 | 258 | 523 | 0.00 | 0.43 | 0.08 | 0.49 | C | 13 | 0.49 |
| 582 | 176 | 0 | 0 | 316 | 492 | 0.36 | 0.00 | 0.00 | 0.64 | C | 13 | 0.64 |
| 583 | 0 | 96 | 140 | 0 | 236 | 0.00 | 0.41 | 0.59 | 0.00 | G | 8 | 0.59 |
| 584 | 69 | 25 | 201 | 241 | 536 | 0.13 | 0.05 | 0.38 | 0.45 | C | 10 | 0.45 |
| 585 | 88 | 0 | 0 | 219 | 307 | 0.29 | 0.00 | 0.00 | 0.71 | C | 9 | 0.71 |
| 586 | 150 | 132 | 213 | 55 | 550 | 0.27 | 0.24 | 0.39 | 0.10 | N | 7 | 0.39 |
| 587 | 121 | 0 | 0 | 0 | 121 | 1.00 | 0.00 | 0.00 | 0.00 | A | 7 | 1.00 |
| 588 | 13 | 0 | 217 | 258 | 488 | 0.03 | 0.00 | 0.44 | 0.53 | C | 9 | 0.53 |
| 589 | 0 | 286 | 0 | 149 | 435 | 0.00 | 0.66 | 0.00 | 0.34 | T | 13 | 0.66 |
| 590 | 204 | 194 | 74 | 0 | 472 | 0.43 | 0.41 | 0.16 | 0.00 | A | 9 | 0.43 |
| 591 | 115 | 0 | 91 | 123 | 329 | 0.35 | 0.00 | 0.28 | 0.37 | C | 8 | 0.37 |
| 592 | 11 | 5 | 153 | 0 | 169 | 0.07 | 0.03 | 0.91 | 0.00 | G | 8 | 0.91 |
| 593 | 284 | 18 | 192 | 1 | 495 | 0.57 | 0.04 | 0.39 | 0.00 | A | 12 | 0.57 |
| 594 | 258 | 18 | 52 | 1 | 329 | 0.78 | 0.05 | 0.16 | 0.00 | A | 13 | 0.78 |
| 595 | 0 | 11 | 0 | 245 | 256 | 0.00 | 0.04 | 0.00 | 0.96 | C | 14 | 0.96 |
| 596 | 0 | 0 | 227 | 119 | 346 | 0.00 | 0.00 | 0.66 | 0.34 | G | 16 | 0.66 |
| 597 | 182 | 13 | 300 | 1 | 496 | 0.37 | 0.03 | 0.60 | 0.00 | G | 19 | 0.60 |
| 598 | 0 | 28 | 99 | 173 | 300 | 0.00 | 0.09 | 0.33 | 0.58 | C | 9 | 0.58 |
| 599 | 1 | 154 | 135 | 184 | 474 | 0.00 | 0.32 | 0.28 | 0.39 | C | 11 | 0.39 |
| 600 | 134 | 0 | 166 | 2 | 302 | 0.44 | 0.00 | 0.55 | 0.01 | G | 11 | 0.55 |
| 601 | 69 | 214 | 0 | 28 | 311 | 0.22 | 0.69 | 0.00 | 0.09 | T | 14 | 0.69 |
| 602 | 0 | 0 | 303 | 71 | 374 | 0.00 | 0.00 | 0.81 | 0.19 | G | 17 | 0.81 |
| 603 | 107 | 0 | 133 | 147 | 387 | 0.28 | 0.00 | 0.34 | 0.38 | C | 10 | 0.38 |
| 604 | 151 | 126 | 0 | 0 | 277 | 0.55 | 0.45 | 0.00 | 0.00 | A | 10 | 0.55 |
| 605 | 0 | 147 | 144 | 152 | 443 | 0.00 | 0.33 | 0.33 | 0.34 | C | 10 | 0.34 |
| 606 | 60 | 107 | 0 | 241 | 408 | 0.15 | 0.26 | 0.00 | 0.59 | C | 14 | 0.59 |
| 607 | 218 | 0 | 2 | 153 | 373 | 0.58 | 0.00 | 0.01 | 0.41 | A | 16 | 0.58 |
| 608 | 0 | 140 | 30 | 164 | 334 | 0.00 | 0.42 | 0.09 | 0.49 | C | 10 | 0.49 |
| 609 | 62 | 26 | 123 | 197 | 408 | 0.15 | 0.06 | 0.30 | 0.48 | C | 8 | 0.48 |
| 610 | 178 | 0 | 3 | 181 | 362 | 0.49 | 0.00 | 0.01 | 0.50 | C | 9 | 0.50 |
| 611 | 0 | 203 | 30 | 0 | 233 | 0.00 | 0.87 | 0.13 | 0.00 | T | 9 | 0.87 |
| 612 | 126 | 0 | 0 | 297 | 423 | 0.30 | 0.00 | 0.00 | 0.70 | C | 14 | 0.70 |
| 613 | 0 | 230 | 44 | 0 | 274 | 0.00 | 0.84 | 0.16 | 0.00 | T | 13 | 0.84 |
| 614 | 272 | 0 | 24 | 20 | 316 | 0.86 | 0.00 | 0.08 | 0.06 | A | 22 | 0.86 |
| 615 | 0 | 155 | 1 | 122 | 278 | 0.00 | 0.56 | 0.00 | 0.44 | T | 11 | 0.56 |
| 616 | 191 | 100 | 0 | 122 | 413 | 0.46 | 0.24 | 0.00 | 0.30 | A | 13 | 0.46 |
| 617 | 138 | 189 | 69 | 1 | 397 | 0.35 | 0.48 | 0.17 | 0.00 | T | 8 | 0.48 |
| 618 | 193 | 0 | 82 | 0 | 275 | 0.70 | 0.00 | 0.30 | 0.00 | A | 9 | 0.70 |
| 619 | 152 | 0 | 88 | 213 | 453 | 0.34 | 0.00 | 0.19 | 0.47 | C | 9 | 0.47 |
| 620 | 29 | 199 | 154 | 0 | 382 | 0.08 | 0.52 | 0.40 | 0.00 | T | 8 | 0.52 |
| 621 | 0 | 319 | 15 | 187 | 521 | 0.00 | 0.61 | 0.03 | 0.36 | T | 13 | 0.61 |
| 622 | 266 | 0 | 0 | 51 | 317 | 0.84 | 0.00 | 0.00 | 0.16 | A | 9 | 0.84 |
| 623 | 0 | 168 | 43 | 1 | 212 | 0.00 | 0.79 | 0.20 | 0.00 | T | 7 | 0.79 |
| 624 | 266 | 110 | 116 | 38 | 530 | 0.50 | 0.21 | 0.22 | 0.07 | A | 12 | 0.50 |
| 625 | 133 | 68 | 67 | 36 | 304 | 0.44 | 0.22 | 0.22 | 0.12 | N | 9 | 0.44 |
| 626 | 275 | 0 | 1 | 155 | 431 | 0.64 | 0.00 | 0.00 | 0.36 | A | 12 | 0.64 |
| 627 | 0 | 0 | 152 | 44 | 196 | 0.00 | 0.00 | 0.78 | 0.22 | G | 11 | 0.78 |
| 628 | 439 | 8 | 5 | 122 | 574 | 0.76 | 0.01 | 0.01 | 0.21 | A | 32 | 0.76 |
| 629 | 0 | 23 | 173 | 0 | 196 | 0.00 | 0.12 | 0.88 | 0.00 | G | 17 | 0.88 |
| 630 | 7 | 99 | 1 | 299 | 406 | 0.02 | 0.24 | 0.00 | 0.74 | C | 21 | 0.74 |
| 631 | 16 | 269 | 76 | 0 | 361 | 0.04 | 0.75 | 0.21 | 0.00 | T | 17 | 0.75 |
| 632 | 20 | 0 | 178 | 166 | 364 | 0.05 | 0.00 | 0.49 | 0.46 | G | 11 | 0.49 |
| 633 | 0 | 180 | 0 | 0 | 180 | 0.00 | 1.00 | 0.00 | 0.00 | T | 10 | 1.00 |
| 634 | 123 | 118 | 0 | 143 | 384 | 0.32 | 0.31 | 0.00 | 0.37 | C | 8 | 0.37 |
| 635 | 182 | 0 | 189 | 2 | 373 | 0.49 | 0.00 | 0.51 | 0.01 | G | 12 | 0.51 |
| 636 | 0 | 0 | 167 | 87 | 254 | 0.00 | 0.00 | 0.66 | 0.34 | G | 11 | 0.66 |
| 637 | 0 | 262 | 0 | 0 | 262 | 0.00 | 1.00 | 0.00 | 0.00 | T | 21 | 1.00 |
| 638 | 0 | 0 | 126 | 237 | 363 | 0.00 | 0.00 | 0.35 | 0.65 | C | 18 | 0.65 |
| 639 | 0 | 182 | 0 | 1 | 183 | 0.00 | 0.99 | 0.00 | 0.01 | T | 19 | 0.99 |
| 640 | 71 | 117 | 312 | 20 | 520 | 0.14 | 0.22 | 0.60 | 0.04 | G | 16 | 0.60 |
| 641 | 100 | 142 | 0 | 12 | 254 | 0.39 | 0.56 | 0.00 | 0.05 | T | 10 | 0.56 |
| 642 | 84 | 0 | 0 | 158 | 242 | 0.35 | 0.00 | 0.00 | 0.65 | C | 21 | 0.65 |
| 643 | 184 | 0 | 129 | 3 | 316 | 0.58 | 0.00 | 0.41 | 0.01 | A | 19 | 0.58 |
| 644 | 269 | 0 | 0 | 8 | 277 | 0.97 | 0.00 | 0.00 | 0.03 | A | 26 | 0.97 |
| 645 | 0 | 144 | 91 | 0 | 235 | 0.00 | 0.61 | 0.39 | 0.00 | T | 13 | 0.61 |
| 646 | 147 | 0 | 108 | 188 | 443 | 0.33 | 0.00 | 0.24 | 0.42 | C | 16 | 0.42 |
| 647 | 40 | 121 | 0 | 261 | 422 | 0.09 | 0.29 | 0.00 | 0.62 | C | 19 | 0.62 |
| 648 | 0 | 240 | 164 | 0 | 404 | 0.00 | 0.59 | 0.41 | 0.00 | T | 13 | 0.59 |
| 649 | 53 | 300 | 5 | 130 | 488 | 0.11 | 0.61 | 0.01 | 0.27 | T | 18 | 0.61 |
| 650 | 217 | 0 | 160 | 0 | 377 | 0.58 | 0.00 | 0.42 | 0.00 | A | 16 | 0.58 |
| 651 | 132 | 0 | 15 | 130 | 277 | 0.48 | 0.00 | 0.05 | 0.47 | A | 8 | 0.48 |
| 652 | 0 | 146 | 12 | 0 | 158 | 0.00 | 0.92 | 0.08 | 0.00 | T | 11 | 0.92 |
| 653 | 297 | 0 | 106 | 28 | 431 | 0.69 | 0.00 | 0.25 | 0.06 | A | 19 | 0.69 |
| 654 | 0 | 202 | 0 | 22 | 224 | 0.00 | 0.90 | 0.00 | 0.10 | T | 10 | 0.90 |
| 655 | 161 | 146 | 194 | 125 | 626 | 0.26 | 0.23 | 0.31 | 0.20 | N | 10 | 0.31 |
| 656 | 80 | 148 | 61 | 0 | 289 | 0.28 | 0.51 | 0.21 | 0.00 | T | 7 | 0.51 |
| 657 | 0 | 205 | 27 | 170 | 402 | 0.00 | 0.51 | 0.07 | 0.42 | T | 7 | 0.51 |
| 658 | 0 | 286 | 8 | 2 | 296 | 0.00 | 0.97 | 0.03 | 0.01 | T | 11 | 0.97 |
| 659 | 212 | 0 | 305 | 1 | 518 | 0.41 | 0.00 | 0.59 | 0.00 | G | 13 | 0.59 |
| 660 | 0 | 141 | 271 | 0 | 412 | 0.00 | 0.34 | 0.66 | 0.00 | G | 12 | 0.66 |
| 661 | 0 | 0 | 248 | 94 | 342 | 0.00 | 0.00 | 0.73 | 0.27 | G | 12 | 0.73 |
| 662 | 256 | 88 | 6 | 0 | 350 | 0.73 | 0.25 | 0.02 | 0.00 | A | 13 | 0.73 |
| 663 | 0 | 91 | 0 | 166 | 257 | 0.00 | 0.35 | 0.00 | 0.65 | C | 9 | 0.65 |
| 664 | 140 | 0 | 215 | 158 | 513 | 0.27 | 0.00 | 0.42 | 0.31 | G | 8 | 0.42 |
| 665 | 0 | 258 | 0 | 0 | 258 | 0.00 | 1.00 | 0.00 | 0.00 | T | 15 | 1.00 |
| 666 | 135 | 0 | 354 | 1 | 490 | 0.28 | 0.00 | 0.72 | 0.00 | G | 19 | 0.72 |
| 667 | 61 | 0 | 265 | 0 | 326 | 0.19 | 0.00 | 0.81 | 0.00 | G | 15 | 0.81 |
| 668 | 0 | 246 | 0 | 27 | 273 | 0.00 | 0.90 | 0.00 | 0.10 | T | 16 | 0.90 |
| 669 | 278 | 0 | 34 | 75 | 387 | 0.72 | 0.00 | 0.09 | 0.19 | A | 16 | 0.72 |
| 670 | 0 | 102 | 0 | 0 | 102 | 0.00 | 1.00 | 0.00 | 0.00 | T | 11 | 1.00 |
| 671 | 0 | 0 | 364 | 1 | 365 | 0.00 | 0.00 | 1.00 | 0.00 | G | 24 | 1.00 |
| 672 | 1 | 0 | 140 | 1 | 142 | 0.01 | 0.00 | 0.99 | 0.01 | G | 9 | 0.99 |
| 673 | 0 | 273 | 0 | 67 | 340 | 0.00 | 0.80 | 0.00 | 0.20 | T | 18 | 0.80 |
| 674 | 77 | 0 | 185 | 0 | 262 | 0.29 | 0.00 | 0.71 | 0.00 | G | 9 | 0.71 |
| 675 | 0 | 0 | 70 | 259 | 329 | 0.00 | 0.00 | 0.21 | 0.79 | C | 14 | 0.79 |
| 676 | 53 | 1 | 97 | 0 | 151 | 0.35 | 0.01 | 0.64 | 0.00 | G | 7 | 0.64 |
| 677 | 110 | 0 | 0 | 222 | 332 | 0.33 | 0.00 | 0.00 | 0.67 | C | 10 | 0.67 |
| 678 | 0 | 196 | 1 | 210 | 407 | 0.00 | 0.48 | 0.00 | 0.52 | C | 13 | 0.52 |
| 679 | 148 | 0 | 231 | 0 | 379 | 0.39 | 0.00 | 0.61 | 0.00 | G | 18 | 0.61 |
| 680 | 61 | 262 | 0 | 0 | 323 | 0.19 | 0.81 | 0.00 | 0.00 | T | 21 | 0.81 |
| 681 | 0 | 238 | 315 | 107 | 660 | 0.00 | 0.36 | 0.48 | 0.16 | G | 20 | 0.48 |
| 682 | 5 | 0 | 203 | 17 | 225 | 0.02 | 0.00 | 0.90 | 0.08 | G | 7 | 0.90 |
| 683 | 23 | 214 | 0 | 28 | 265 | 0.09 | 0.81 | 0.00 | 0.11 | T | 9 | 0.81 |
| 684 | 0 | 0 | 312 | 91 | 403 | 0.00 | 0.00 | 0.77 | 0.23 | G | 13 | 0.77 |
| 685 | 207 | 57 | 0 | 216 | 480 | 0.43 | 0.12 | 0.00 | 0.45 | C | 10 | 0.45 |
| 686 | 0 | 0 | 97 | 0 | 97 | 0.00 | 0.00 | 1.00 | 0.00 | G | 7 | 1.00 |
| 687 | 185 | 144 | 2 | 25 | 356 | 0.52 | 0.40 | 0.01 | 0.07 | A | 8 | 0.52 |
| 688 | 0 | 141 | 7 | 152 | 300 | 0.00 | 0.47 | 0.02 | 0.51 | C | 11 | 0.51 |
| 689 | 249 | 0 | 0 | 0 | 249 | 1.00 | 0.00 | 0.00 | 0.00 | A | 23 | 1.00 |
| 690 | 224 | 139 | 114 | 10 | 487 | 0.46 | 0.29 | 0.23 | 0.02 | A | 10 | 0.46 |
| 691 | 188 | 0 | 0 | 46 | 234 | 0.80 | 0.00 | 0.00 | 0.20 | A | 7 | 0.80 |
| 692 | 0 | 359 | 45 | 0 | 404 | 0.00 | 0.89 | 0.11 | 0.00 | T | 15 | 0.89 |
| 693 | 0 | 0 | 36 | 75 | 111 | 0.00 | 0.00 | 0.32 | 0.68 | C | 13 | 0.68 |
| 694 | 228 | 0 | 70 | 2 | 300 | 0.76 | 0.00 | 0.23 | 0.01 | A | 9 | 0.76 |
| 695 | 0 | 61 | 79 | 0 | 140 | 0.00 | 0.44 | 0.56 | 0.00 | G | 7 | 0.56 |
| 696 | 248 | 42 | 154 | 3 | 447 | 0.55 | 0.09 | 0.34 | 0.01 | A | 8 | 0.55 |
| 697 | 0 | 0 | 254 | 183 | 437 | 0.00 | 0.00 | 0.58 | 0.42 | G | 8 | 0.58 |
| 698 | 7 | 0 | 223 | 166 | 396 | 0.02 | 0.00 | 0.56 | 0.42 | G | 8 | 0.56 |
| 699 | 38 | 56 | 231 | 0 | 325 | 0.12 | 0.17 | 0.71 | 0.00 | G | 11 | 0.71 |
| 700 | 93 | 0 | 0 | 230 | 323 | 0.29 | 0.00 | 0.00 | 0.71 | C | 11 | 0.71 |
| 701 | 236 | 0 | 0 | 0 | 236 | 1.00 | 0.00 | 0.00 | 0.00 | A | 9 | 1.00 |
| 702 | 0 | 0 | 51 | 24 | 75 | 0.00 | 0.00 | 0.68 | 0.32 | G | 6 | 0.68 |
| 703 | 27 | 294 | 231 | 37 | 589 | 0.05 | 0.50 | 0.39 | 0.06 | T | 12 | 0.50 |
| 704 | 41 | 0 | 2 | 215 | 258 | 0.16 | 0.00 | 0.01 | 0.83 | C | 9 | 0.83 |
| 705 | 35 | 177 | 104 | 0 | 316 | 0.11 | 0.56 | 0.33 | 0.00 | T | 6 | 0.56 |
| 706 | 93 | 0 | 97 | 212 | 402 | 0.23 | 0.00 | 0.24 | 0.53 | C | 14 | 0.53 |
| 707 | 165 | 22 | 148 | 164 | 499 | 0.33 | 0.04 | 0.30 | 0.33 | A | 10 | 0.33 |
| 708 | 167 | 4 | 125 | 0 | 296 | 0.56 | 0.01 | 0.42 | 0.00 | A | 7 | 0.56 |
| 709 | 0 | 0 | 40 | 152 | 192 | 0.00 | 0.00 | 0.21 | 0.79 | C | 7 | 0.79 |
| 710 | 171 | 209 | 39 | 0 | 419 | 0.41 | 0.50 | 0.09 | 0.00 | T | 14 | 0.50 |
| 711 | 40 | 0 | 124 | 245 | 409 | 0.10 | 0.00 | 0.30 | 0.60 | C | 13 | 0.60 |
| 712 | 30 | 0 | 17 | 188 | 235 | 0.13 | 0.00 | 0.07 | 0.80 | C | 10 | 0.80 |
| 713 | 0 | 330 | 0 | 3 | 333 | 0.00 | 0.99 | 0.00 | 0.01 | T | 16 | 0.99 |
| 714 | 61 | 0 | 352 | 74 | 487 | 0.13 | 0.00 | 0.72 | 0.15 | G | 13 | 0.72 |
| 715 | 2 | 0 | 336 | 2 | 340 | 0.01 | 0.00 | 0.99 | 0.01 | G | 21 | 0.99 |
| 716 | 21 | 233 | 0 | 13 | 267 | 0.08 | 0.87 | 0.00 | 0.05 | T | 18 | 0.87 |
| 717 | 29 | 84 | 354 | 0 | 467 | 0.06 | 0.18 | 0.76 | 0.00 | G | 27 | 0.76 |
| 718 | 135 | 0 | 0 | 75 | 210 | 0.64 | 0.00 | 0.00 | 0.36 | A | 11 | 0.64 |
| 719 | 144 | 176 | 0 | 11 | 331 | 0.44 | 0.53 | 0.00 | 0.03 | T | 11 | 0.53 |
| 720 | 189 | 0 | 310 | 0 | 499 | 0.38 | 0.00 | 0.62 | 0.00 | G | 16 | 0.62 |
| 721 | 0 | 0 | 191 | 131 | 322 | 0.00 | 0.00 | 0.59 | 0.41 | G | 7 | 0.59 |
| 722 | 1 | 119 | 122 | 174 | 416 | 0.00 | 0.29 | 0.29 | 0.42 | C | 10 | 0.42 |
| 723 | 39 | 119 | 176 | 0 | 334 | 0.12 | 0.36 | 0.53 | 0.00 | G | 6 | 0.53 |
| 724 | 85 | 292 | 102 | 3 | 482 | 0.18 | 0.61 | 0.21 | 0.01 | T | 13 | 0.61 |
| 725 | 81 | 305 | 20 | 0 | 406 | 0.20 | 0.75 | 0.05 | 0.00 | T | 23 | 0.75 |
| 726 | 0 | 0 | 0 | 221 | 221 | 0.00 | 0.00 | 0.00 | 1.00 | C | 16 | 1.00 |
| 727 | 75 | 0 | 0 | 183 | 258 | 0.29 | 0.00 | 0.00 | 0.71 | C | 20 | 0.71 |
| 728 | 104 | 0 | 221 | 0 | 325 | 0.32 | 0.00 | 0.68 | 0.00 | G | 17 | 0.68 |
| 729 | 47 | 103 | 0 | 80 | 230 | 0.20 | 0.45 | 0.00 | 0.35 | T | 6 | 0.45 |
| 730 | 0 | 0 | 82 | 0 | 82 | 0.00 | 0.00 | 1.00 | 0.00 | G | 10 | 1.00 |
| 731 | 62 | 45 | 27 | 268 | 402 | 0.15 | 0.11 | 0.07 | 0.67 | C | 17 | 0.67 |
| 732 | 121 | 18 | 3 | 230 | 372 | 0.33 | 0.05 | 0.01 | 0.62 | C | 17 | 0.62 |
| 733 | 121 | 298 | 0 | 0 | 419 | 0.29 | 0.71 | 0.00 | 0.00 | T | 18 | 0.71 |
| 734 | 64 | 0 | 77 | 219 | 360 | 0.18 | 0.00 | 0.21 | 0.61 | C | 16 | 0.61 |
| 735 | 69 | 214 | 46 | 0 | 329 | 0.21 | 0.65 | 0.14 | 0.00 | T | 12 | 0.65 |
| 736 | 0 | 0 | 1 | 194 | 195 | 0.00 | 0.00 | 0.01 | 0.99 | C | 9 | 0.99 |
| 737 | 107 | 73 | 6 | 193 | 379 | 0.28 | 0.19 | 0.02 | 0.51 | C | 6 | 0.51 |
| 738 | 92 | 0 | 3 | 76 | 171 | 0.54 | 0.00 | 0.02 | 0.44 | A | 6 | 0.54 |
| 739 | 161 | 175 | 29 | 0 | 365 | 0.44 | 0.48 | 0.08 | 0.00 | T | 6 | 0.48 |
| 740 | 0 | 200 | 138 | 16 | 354 | 0.00 | 0.56 | 0.39 | 0.05 | T | 6 | 0.56 |
| 741 | 156 | 0 | 43 | 56 | 255 | 0.61 | 0.00 | 0.17 | 0.22 | A | 9 | 0.61 |
| 742 | 212 | 0 | 44 | 0 | 256 | 0.83 | 0.00 | 0.17 | 0.00 | A | 11 | 0.83 |
| 743 | 20 | 120 | 175 | 17 | 332 | 0.06 | 0.36 | 0.53 | 0.05 | G | 15 | 0.53 |
| 744 | 47 | 268 | 118 | 7 | 440 | 0.11 | 0.61 | 0.27 | 0.02 | T | 12 | 0.61 |
| 745 | 10 | 0 | 101 | 34 | 145 | 0.07 | 0.00 | 0.70 | 0.23 | G | 6 | 0.70 |
| 746 | 13 | 327 | 43 | 0 | 383 | 0.03 | 0.85 | 0.11 | 0.00 | T | 19 | 0.85 |
| 747 | 0 | 0 | 143 | 222 | 365 | 0.00 | 0.00 | 0.39 | 0.61 | C | 25 | 0.61 |
| 748 | 199 | 2 | 0 | 0 | 201 | 0.99 | 0.01 | 0.00 | 0.00 | A | 21 | 0.99 |
| 749 | 0 | 53 | 176 | 0 | 229 | 0.00 | 0.23 | 0.77 | 0.00 | G | 13 | 0.77 |
| 750 | 4 | 94 | 136 | 0 | 234 | 0.02 | 0.40 | 0.58 | 0.00 | G | 13 | 0.58 |
| 751 | 14 | 0 | 145 | 195 | 354 | 0.04 | 0.00 | 0.41 | 0.55 | C | 17 | 0.55 |
| 752 | 70 | 192 | 94 | 8 | 364 | 0.19 | 0.53 | 0.26 | 0.02 | T | 7 | 0.53 |
| 753 | 75 | 196 | 0 | 6 | 277 | 0.27 | 0.71 | 0.00 | 0.02 | T | 13 | 0.71 |
| 754 | 184 | 0 | 313 | 1 | 498 | 0.37 | 0.00 | 0.63 | 0.00 | G | 20 | 0.63 |
| 755 | 0 | 2 | 0 | 184 | 186 | 0.00 | 0.01 | 0.00 | 0.99 | C | 14 | 0.99 |
| 756 | 0 | 115 | 166 | 0 | 281 | 0.00 | 0.41 | 0.59 | 0.00 | G | 14 | 0.59 |
| 757 | 164 | 168 | 0 | 0 | 332 | 0.49 | 0.51 | 0.00 | 0.00 | T | 12 | 0.51 |
| 758 | 49 | 0 | 105 | 176 | 330 | 0.15 | 0.00 | 0.32 | 0.53 | C | 6 | 0.53 |
| 759 | 0 | 105 | 103 | 0 | 208 | 0.00 | 0.50 | 0.50 | 0.00 | T | 6 | 0.50 |
| 760 | 242 | 0 | 76 | 46 | 364 | 0.66 | 0.00 | 0.21 | 0.13 | A | 9 | 0.66 |
| 761 | 0 | 289 | 28 | 0 | 317 | 0.00 | 0.91 | 0.09 | 0.00 | T | 9 | 0.91 |
| 762 | 0 | 289 | 5 | 36 | 330 | 0.00 | 0.88 | 0.02 | 0.11 | T | 9 | 0.88 |
| 763 | 203 | 0 | 33 | 183 | 419 | 0.48 | 0.00 | 0.08 | 0.44 | A | 9 | 0.48 |
| 764 | 32 | 167 | 32 | 0 | 231 | 0.14 | 0.72 | 0.14 | 0.00 | T | 6 | 0.72 |
| 765 | 5 | 90 | 12 | 367 | 474 | 0.01 | 0.19 | 0.03 | 0.77 | C | 21 | 0.77 |
| 766 | 0 | 90 | 9 | 343 | 442 | 0.00 | 0.20 | 0.02 | 0.78 | C | 39 | 0.78 |
| 767 | 82 | 0 | 58 | 339 | 479 | 0.17 | 0.00 | 0.12 | 0.71 | C | 32 | 0.71 |
| 768 | 82 | 9 | 12 | 337 | 440 | 0.19 | 0.02 | 0.03 | 0.77 | C | 37 | 0.77 |
| 769 | 16 | 7 | 9 | 349 | 381 | 0.04 | 0.02 | 0.02 | 0.92 | C | 39 | 0.92 |
| 770 | 100 | 49 | 0 | 0 | 149 | 0.67 | 0.33 | 0.00 | 0.00 | A | 22 | 0.67 |
| 771 | 4 | 104 | 0 | 0 | 108 | 0.04 | 0.96 | 0.00 | 0.00 | T | 24 | 0.96 |
| 772 | 34 | 60 | 203 | 0 | 297 | 0.11 | 0.20 | 0.68 | 0.00 | G | 23 | 0.68 |
| 773 | 277 | 33 | 0 | 147 | 457 | 0.61 | 0.07 | 0.00 | 0.32 | A | 20 | 0.61 |
| 774 | 281 | 0 | 10 | 123 | 414 | 0.68 | 0.00 | 0.02 | 0.30 | A | 15 | 0.68 |
| 775 | 0 | 10 | 157 | 103 | 270 | 0.00 | 0.04 | 0.58 | 0.38 | G | 12 | 0.58 |
| 776 | 84 | 0 | 0 | 0 | 84 | 1.00 | 0.00 | 0.00 | 0.00 | A | 19 | 1.00 |
| 777 | 80 | 135 | 2 | 273 | 490 | 0.16 | 0.28 | 0.00 | 0.56 | C | 15 | 0.56 |
| 778 | 99 | 0 | 88 | 0 | 187 | 0.53 | 0.00 | 0.47 | 0.00 | A | 6 | 0.53 |
| 779 | 256 | 1 | 0 | 5 | 262 | 0.98 | 0.00 | 0.00 | 0.02 | A | 14 | 0.98 |
| 780 | 0 | 37 | 143 | 4 | 184 | 0.00 | 0.20 | 0.78 | 0.02 | G | 8 | 0.78 |
| 781 | 0 | 0 | 106 | 10 | 116 | 0.00 | 0.00 | 0.91 | 0.09 | G | 9 | 0.91 |
| 782 | 293 | 0 | 0 | 49 | 342 | 0.86 | 0.00 | 0.00 | 0.14 | A | 33 | 0.86 |
| 783 | 149 | 0 | 47 | 124 | 320 | 0.47 | 0.00 | 0.15 | 0.39 | A | 11 | 0.47 |
| 784 | 0 | 164 | 8 | 15 | 187 | 0.00 | 0.88 | 0.04 | 0.08 | T | 16 | 0.88 |
| 785 | 180 | 0 | 50 | 1 | 231 | 0.78 | 0.00 | 0.22 | 0.00 | A | 9 | 0.78 |
| 786 | 0 | 339 | 0 | 20 | 359 | 0.00 | 0.94 | 0.00 | 0.06 | T | 18 | 0.94 |
| 787 | 39 | 0 | 218 | 0 | 257 | 0.15 | 0.00 | 0.85 | 0.00 | G | 11 | 0.85 |
| 788 | 0 | 0 | 0 | 116 | 116 | 0.00 | 0.00 | 0.00 | 1.00 | C | 6 | 1.00 |
| 789 | 272 | 0 | 34 | 0 | 306 | 0.89 | 0.00 | 0.11 | 0.00 | A | 12 | 0.89 |
| 790 | 0 | 165 | 0 | 0 | 165 | 0.00 | 1.00 | 0.00 | 0.00 | T | 9 | 1.00 |
| 791 | 79 | 174 | 43 | 87 | 383 | 0.21 | 0.45 | 0.11 | 0.23 | T | 6 | 0.45 |
| 792 | 56 | 0 | 31 | 110 | 197 | 0.28 | 0.00 | 0.16 | 0.56 | C | 6 | 0.56 |
| 793 | 62 | 259 | 19 | 186 | 526 | 0.12 | 0.49 | 0.04 | 0.35 | T | 12 | 0.49 |
| 794 | 42 | 115 | 196 | 0 | 353 | 0.12 | 0.33 | 0.56 | 0.00 | G | 10 | 0.56 |
| 795 | 2 | 0 | 0 | 311 | 313 | 0.01 | 0.00 | 0.00 | 0.99 | C | 21 | 0.99 |
| 796 | 99 | 56 | 30 | 76 | 261 | 0.38 | 0.21 | 0.11 | 0.29 | N | 8 | 0.38 |
| 797 | 111 | 5 | 167 | 123 | 406 | 0.27 | 0.01 | 0.41 | 0.30 | G | 13 | 0.41 |
| 798 | 118 | 2 | 188 | 0 | 308 | 0.38 | 0.01 | 0.61 | 0.00 | G | 13 | 0.61 |
| 799 | 119 | 53 | 0 | 76 | 248 | 0.48 | 0.21 | 0.00 | 0.31 | A | 6 | 0.48 |
| 800 | 123 | 63 | 258 | 1 | 445 | 0.28 | 0.14 | 0.58 | 0.00 | G | 29 | 0.58 |
| 801 | 105 | 186 | 0 | 6 | 297 | 0.35 | 0.63 | 0.00 | 0.02 | T | 19 | 0.63 |
| 802 | 116 | 0 | 259 | 0 | 375 | 0.31 | 0.00 | 0.69 | 0.00 | G | 29 | 0.69 |
| 803 | 92 | 5 | 0 | 194 | 291 | 0.32 | 0.02 | 0.00 | 0.67 | C | 15 | 0.67 |
| 804 | 22 | 17 | 100 | 282 | 421 | 0.05 | 0.04 | 0.24 | 0.67 | C | 37 | 0.67 |
| 805 | 0 | 0 | 29 | 0 | 29 | 0.00 | 0.00 | 1.00 | 0.00 | G | 16 | 1.00 |
| 806 | 227 | 0 | 0 | 0 | 227 | 1.00 | 0.00 | 0.00 | 0.00 | A | 14 | 1.00 |
| 807 | 0 | 168 | 4 | 126 | 298 | 0.00 | 0.56 | 0.01 | 0.42 | T | 12 | 0.56 |
| 808 | 36 | 0 | 279 | 0 | 315 | 0.11 | 0.00 | 0.89 | 0.00 | G | 25 | 0.89 |
| 809 | 0 | 0 | 0 | 29 | 29 | 0.00 | 0.00 | 0.00 | 1.00 | C | 10 | 1.00 |
| 810 | 309 | 0 | 63 | 40 | 412 | 0.75 | 0.00 | 0.15 | 0.10 | A | 15 | 0.75 |
| 811 | 0 | 85 | 123 | 10 | 218 | 0.00 | 0.39 | 0.56 | 0.05 | G | 9 | 0.56 |
| 812 | 70 | 114 | 137 | 0 | 321 | 0.22 | 0.36 | 0.43 | 0.00 | G | 7 | 0.43 |
| 813 | 3 | 0 | 0 | 236 | 239 | 0.01 | 0.00 | 0.00 | 0.99 | C | 26 | 0.99 |
| 814 | 91 | 0 | 0 | 29 | 120 | 0.76 | 0.00 | 0.00 | 0.24 | A | 7 | 0.76 |
| 815 | 0 | 210 | 93 | 27 | 330 | 0.00 | 0.64 | 0.28 | 0.08 | T | 13 | 0.64 |
| 816 | 243 | 0 | 37 | 9 | 289 | 0.84 | 0.00 | 0.13 | 0.03 | A | 21 | 0.84 |
| 817 | 326 | 108 | 19 | 6 | 459 | 0.71 | 0.24 | 0.04 | 0.01 | A | 14 | 0.71 |
| 818 | 0 | 1 | 76 | 0 | 77 | 0.00 | 0.01 | 0.99 | 0.00 | G | 9 | 0.99 |
| 819 | 252 | 0 | 2 | 47 | 301 | 0.84 | 0.00 | 0.01 | 0.16 | A | 25 | 0.84 |
| 820 | 0 | 99 | 23 | 194 | 316 | 0.00 | 0.31 | 0.07 | 0.61 | C | 17 | 0.61 |
| 821 | 111 | 0 | 0 | 192 | 303 | 0.37 | 0.00 | 0.00 | 0.63 | C | 12 | 0.63 |
| 822 | 102 | 0 | 130 | 0 | 232 | 0.44 | 0.00 | 0.56 | 0.00 | G | 8 | 0.56 |
| 823 | 0 | 202 | 0 | 191 | 393 | 0.00 | 0.51 | 0.00 | 0.49 | T | 14 | 0.51 |
| 824 | 106 | 194 | 0 | 0 | 300 | 0.35 | 0.65 | 0.00 | 0.00 | T | 7 | 0.65 |
| 825 | 90 | 131 | 145 | 59 | 425 | 0.21 | 0.31 | 0.34 | 0.14 | N | 6 | 0.34 |
| 826 | 0 | 157 | 92 | 182 | 431 | 0.00 | 0.36 | 0.21 | 0.42 | C | 9 | 0.42 |
| 827 | 96 | 0 | 0 | 226 | 322 | 0.30 | 0.00 | 0.00 | 0.70 | C | 18 | 0.70 |
| 828 | 146 | 0 | 31 | 196 | 373 | 0.39 | 0.00 | 0.08 | 0.53 | C | 9 | 0.53 |
| 829 | 33 | 72 | 65 | 206 | 376 | 0.09 | 0.19 | 0.17 | 0.55 | C | 12 | 0.55 |
| 830 | 0 | 150 | 0 | 0 | 150 | 0.00 | 1.00 | 0.00 | 0.00 | T | 6 | 1.00 |
| 831 | 0 | 1 | 394 | 1 | 396 | 0.00 | 0.00 | 0.99 | 0.00 | G | 30 | 0.99 |
| 832 | 214 | 0 | 154 | 21 | 389 | 0.55 | 0.00 | 0.40 | 0.05 | A | 23 | 0.55 |
| 833 | 0 | 262 | 64 | 0 | 326 | 0.00 | 0.80 | 0.20 | 0.00 | T | 19 | 0.80 |
| 834 | 75 | 251 | 19 | 147 | 492 | 0.15 | 0.51 | 0.04 | 0.30 | T | 12 | 0.51 |
| 835 | 95 | 0 | 0 | 182 | 277 | 0.34 | 0.00 | 0.00 | 0.66 | C | 12 | 0.66 |
| 836 | 22 | 227 | 67 | 141 | 457 | 0.05 | 0.50 | 0.15 | 0.31 | T | 8 | 0.50 |
| 837 | 6 | 303 | 111 | 0 | 420 | 0.01 | 0.72 | 0.26 | 0.00 | T | 18 | 0.72 |
| 838 | 364 | 0 | 0 | 16 | 380 | 0.96 | 0.00 | 0.00 | 0.04 | A | 37 | 0.96 |
| 839 | 0 | 0 | 50 | 98 | 148 | 0.00 | 0.00 | 0.34 | 0.66 | C | 17 | 0.66 |
| 840 | 1 | 203 | 0 | 0 | 204 | 0.00 | 1.00 | 0.00 | 0.00 | T | 16 | 1.00 |
| 841 | 11 | 0 | 109 | 281 | 401 | 0.03 | 0.00 | 0.27 | 0.70 | C | 27 | 0.70 |
| 842 | 51 | 0 | 101 | 0 | 152 | 0.34 | 0.00 | 0.66 | 0.00 | G | 6 | 0.66 |
| 843 | 58 | 0 | 239 | 26 | 323 | 0.18 | 0.00 | 0.74 | 0.08 | G | 18 | 0.74 |
| 844 | 0 | 2 | 70 | 173 | 245 | 0.00 | 0.01 | 0.29 | 0.71 | C | 19 | 0.71 |
| 845 | 123 | 0 | 1 | 169 | 293 | 0.42 | 0.00 | 0.00 | 0.58 | C | 18 | 0.58 |
| 846 | 0 | 164 | 107 | 0 | 271 | 0.00 | 0.61 | 0.39 | 0.00 | T | 15 | 0.61 |
| 847 | 149 | 128 | 51 | 86 | 414 | 0.36 | 0.31 | 0.12 | 0.21 | N | 6 | 0.36 |
| 848 | 110 | 0 | 95 | 0 | 205 | 0.54 | 0.00 | 0.46 | 0.00 | A | 7 | 0.54 |
| 849 | 0 | 377 | 62 | 0 | 439 | 0.00 | 0.86 | 0.14 | 0.00 | T | 18 | 0.86 |
| 850 | 1 | 388 | 0 | 8 | 397 | 0.00 | 0.98 | 0.00 | 0.02 | T | 32 | 0.98 |
| 851 | 0 | 0 | 0 | 25 | 25 | 0.00 | 0.00 | 0.00 | 1.00 | C | 26 | 1.00 |
| 852 | 205 | 0 | 3 | 55 | 263 | 0.78 | 0.00 | 0.01 | 0.21 | A | 16 | 0.78 |
| 853 | 0 | 314 | 57 | 0 | 371 | 0.00 | 0.85 | 0.15 | 0.00 | T | 20 | 0.85 |
| 854 | 0 | 0 | 311 | 11 | 322 | 0.00 | 0.00 | 0.97 | 0.03 | G | 32 | 0.97 |
| 855 | 40 | 0 | 0 | 107 | 147 | 0.27 | 0.00 | 0.00 | 0.73 | C | 6 | 0.73 |
| 856 | 38 | 341 | 0 | 38 | 417 | 0.09 | 0.82 | 0.00 | 0.09 | T | 10 | 0.82 |
| 857 | 3 | 0 | 150 | 1 | 154 | 0.02 | 0.00 | 0.97 | 0.01 | G | 11 | 0.97 |
| 858 | 150 | 0 | 0 | 18 | 168 | 0.89 | 0.00 | 0.00 | 0.11 | A | 6 | 0.89 |
| 859 | 91 | 294 | 65 | 34 | 484 | 0.19 | 0.61 | 0.13 | 0.07 | T | 14 | 0.61 |
| 860 | 0 | 236 | 94 | 3 | 333 | 0.00 | 0.71 | 0.28 | 0.01 | T | 6 | 0.71 |
| 861 | 388 | 0 | 2 | 0 | 390 | 0.99 | 0.00 | 0.01 | 0.00 | A | 30 | 0.99 |
| 862 | 0 | 0 | 15 | 230 | 245 | 0.00 | 0.00 | 0.06 | 0.94 | C | 17 | 0.94 |
| 863 | 14 | 340 | 46 | 0 | 400 | 0.04 | 0.85 | 0.12 | 0.00 | T | 27 | 0.85 |
| 864 | 215 | 0 | 27 | 0 | 242 | 0.89 | 0.00 | 0.11 | 0.00 | A | 11 | 0.89 |
| 865 | 79 | 59 | 53 | 159 | 350 | 0.23 | 0.17 | 0.15 | 0.45 | N | 20 | 0.45 |
| 866 | 0 | 124 | 117 | 8 | 249 | 0.00 | 0.50 | 0.47 | 0.03 | T | 11 | 0.50 |
| 867 | 283 | 0 | 61 | 0 | 344 | 0.82 | 0.00 | 0.18 | 0.00 | A | 29 | 0.82 |
| 868 | 0 | 43 | 60 | 158 | 261 | 0.00 | 0.16 | 0.23 | 0.61 | C | 6 | 0.61 |
| 869 | 0 | 0 | 97 | 0 | 97 | 0.00 | 0.00 | 1.00 | 0.00 | G | 6 | 1.00 |
| 870 | 2 | 0 | 147 | 0 | 149 | 0.01 | 0.00 | 0.99 | 0.00 | G | 13 | 0.99 |
| 871 | 23 | 204 | 194 | 22 | 443 | 0.05 | 0.46 | 0.44 | 0.05 | T | 6 | 0.46 |
| 872 | 119 | 0 | 114 | 33 | 266 | 0.45 | 0.00 | 0.43 | 0.12 | A | 4 | 0.45 |
| 873 | 0 | 183 | 15 | 49 | 247 | 0.00 | 0.74 | 0.06 | 0.20 | T | 6 | 0.74 |
| 874 | 0 | 187 | 15 | 169 | 371 | 0.00 | 0.50 | 0.04 | 0.46 | T | 9 | 0.50 |
| 875 | 136 | 0 | 0 | 13 | 149 | 0.91 | 0.00 | 0.00 | 0.09 | A | 5 | 0.91 |
| 876 | 117 | 0 | 266 | 13 | 396 | 0.30 | 0.00 | 0.67 | 0.03 | G | 23 | 0.67 |
| 877 | 163 | 0 | 0 | 17 | 180 | 0.91 | 0.00 | 0.00 | 0.09 | A | 19 | 0.91 |
| 878 | 0 | 120 | 123 | 0 | 243 | 0.00 | 0.49 | 0.51 | 0.00 | G | 9 | 0.51 |
| 879 | 54 | 104 | 0 | 190 | 348 | 0.16 | 0.30 | 0.00 | 0.55 | C | 12 | 0.55 |
| 880 | 16 | 260 | 83 | 138 | 497 | 0.03 | 0.52 | 0.17 | 0.28 | T | 13 | 0.52 |
| 881 | 17 | 190 | 0 | 204 | 411 | 0.04 | 0.46 | 0.00 | 0.50 | C | 15 | 0.50 |
| 882 | 0 | 0 | 18 | 282 | 300 | 0.00 | 0.00 | 0.06 | 0.94 | C | 21 | 0.94 |
| 883 | 57 | 0 | 29 | 0 | 86 | 0.66 | 0.00 | 0.34 | 0.00 | A | 9 | 0.66 |
| 884 | 60 | 178 | 4 | 0 | 242 | 0.25 | 0.74 | 0.02 | 0.00 | T | 11 | 0.74 |
| 885 | 84 | 0 | 0 | 190 | 274 | 0.31 | 0.00 | 0.00 | 0.69 | C | 19 | 0.69 |
| 886 | 0 | 1 | 165 | 0 | 166 | 0.00 | 0.01 | 0.99 | 0.00 | G | 21 | 0.99 |
| 887 | 196 | 14 | 129 | 11 | 350 | 0.56 | 0.04 | 0.37 | 0.03 | A | 22 | 0.56 |
| 888 | 0 | 131 | 106 | 0 | 237 | 0.00 | 0.55 | 0.45 | 0.00 | T | 11 | 0.55 |
| 889 | 50 | 0 | 62 | 194 | 306 | 0.16 | 0.00 | 0.20 | 0.63 | C | 8 | 0.63 |
| 890 | 0 | 133 | 124 | 235 | 492 | 0.00 | 0.27 | 0.25 | 0.48 | C | 10 | 0.48 |
| 891 | 5 | 98 | 85 | 208 | 396 | 0.01 | 0.25 | 0.21 | 0.53 | C | 5 | 0.53 |
| 892 | 2 | 3 | 192 | 210 | 407 | 0.00 | 0.01 | 0.47 | 0.52 | C | 9 | 0.52 |
| 893 | 0 | 0 | 3 | 0 | 3 | 0.00 | 0.00 | 1.00 | 0.00 | G | 6 | 1.00 |
| 894 | 176 | 230 | 0 | 53 | 459 | 0.38 | 0.50 | 0.00 | 0.12 | T | 6 | 0.50 |
| 895 | 0 | 0 | 58 | 0 | 58 | 0.00 | 0.00 | 1.00 | 0.00 | G | 17 | 1.00 |
| 896 | 1 | 0 | 82 | 249 | 332 | 0.00 | 0.00 | 0.25 | 0.75 | C | 18 | 0.75 |
| 897 | 3 | 165 | 0 | 154 | 322 | 0.01 | 0.51 | 0.00 | 0.48 | T | 8 | 0.51 |
| 898 | 52 | 171 | 45 | 123 | 391 | 0.13 | 0.44 | 0.12 | 0.31 | N | 8 | 0.44 |
| 899 | 36 | 171 | 3 | 0 | 210 | 0.17 | 0.81 | 0.01 | 0.00 | T | 13 | 0.81 |
| 900 | 0 | 0 | 0 | 193 | 193 | 0.00 | 0.00 | 0.00 | 1.00 | C | 23 | 1.00 |
| 901 | 134 | 41 | 51 | 133 | 359 | 0.37 | 0.11 | 0.14 | 0.37 | N | 9 | 0.37 |
| 902 | 66 | 0 | 113 | 58 | 237 | 0.28 | 0.00 | 0.48 | 0.24 | G | 10 | 0.48 |
| 903 | 0 | 165 | 32 | 17 | 214 | 0.00 | 0.77 | 0.15 | 0.08 | T | 28 | 0.77 |
| 904 | 51 | 187 | 26 | 0 | 264 | 0.19 | 0.71 | 0.10 | 0.00 | T | 17 | 0.71 |
| 905 | 64 | 0 | 65 | 107 | 236 | 0.27 | 0.00 | 0.28 | 0.45 | C | 9 | 0.45 |
| 906 | 99 | 143 | 91 | 81 | 414 | 0.24 | 0.35 | 0.22 | 0.20 | N | 10 | 0.35 |
| 907 | 55 | 153 | 0 | 53 | 261 | 0.21 | 0.59 | 0.00 | 0.20 | T | 13 | 0.59 |
| 908 | 68 | 0 | 227 | 0 | 295 | 0.23 | 0.00 | 0.77 | 0.00 | G | 26 | 0.77 |
| 909 | 243 | 0 | 0 | 48 | 291 | 0.84 | 0.00 | 0.00 | 0.16 | A | 13 | 0.84 |
| 910 | 0 | 213 | 1 | 52 | 266 | 0.00 | 0.80 | 0.00 | 0.20 | T | 14 | 0.80 |
| 911 | 42 | 0 | 78 | 147 | 267 | 0.16 | 0.00 | 0.29 | 0.55 | C | 9 | 0.55 |
| 912 | 0 | 1 | 45 | 183 | 229 | 0.00 | 0.00 | 0.20 | 0.80 | C | 20 | 0.80 |
| 913 | 120 | 0 | 61 | 0 | 181 | 0.66 | 0.00 | 0.34 | 0.00 | A | 9 | 0.66 |
| 914 | 59 | 74 | 157 | 21 | 311 | 0.19 | 0.24 | 0.50 | 0.07 | G | 9 | 0.50 |
| 915 | 0 | 136 | 124 | 0 | 260 | 0.00 | 0.52 | 0.48 | 0.00 | T | 6 | 0.52 |
| 916 | 193 | 0 | 0 | 0 | 193 | 1.00 | 0.00 | 0.00 | 0.00 | A | 10 | 1.00 |
| 917 | 173 | 54 | 105 | 6 | 338 | 0.51 | 0.16 | 0.31 | 0.02 | A | 9 | 0.51 |
| 918 | 0 | 62 | 0 | 0 | 62 | 0.00 | 1.00 | 0.00 | 0.00 | T | 15 | 1.00 |
| 919 | 138 | 0 | 19 | 141 | 298 | 0.46 | 0.00 | 0.06 | 0.47 | C | 10 | 0.47 |
| 920 | 121 | 8 | 128 | 115 | 372 | 0.33 | 0.02 | 0.34 | 0.31 | G | 10 | 0.34 |
| 921 | 165 | 0 | 71 | 38 | 274 | 0.60 | 0.00 | 0.26 | 0.14 | A | 6 | 0.60 |
| 922 | 0 | 180 | 1 | 104 | 285 | 0.00 | 0.63 | 0.00 | 0.36 | T | 6 | 0.63 |
| 923 | 122 | 0 | 71 | 176 | 369 | 0.33 | 0.00 | 0.19 | 0.48 | C | 11 | 0.48 |
| 924 | 96 | 94 | 91 | 84 | 365 | 0.26 | 0.26 | 0.25 | 0.23 | N | 5 | 0.26 |
| 925 | 0 | 188 | 0 | 18 | 206 | 0.00 | 0.91 | 0.00 | 0.09 | T | 9 | 0.91 |
| 926 | 82 | 185 | 210 | 8 | 485 | 0.17 | 0.38 | 0.43 | 0.02 | G | 9 | 0.43 |
| 927 | 63 | 0 | 52 | 188 | 303 | 0.21 | 0.00 | 0.17 | 0.62 | C | 6 | 0.62 |
| 928 | 83 | 0 | 0 | 191 | 274 | 0.30 | 0.00 | 0.00 | 0.70 | C | 11 | 0.70 |
| 929 | 0 | 0 | 73 | 0 | 73 | 0.00 | 0.00 | 1.00 | 0.00 | G | 8 | 1.00 |
| 930 | 0 | 218 | 92 | 43 | 353 | 0.00 | 0.62 | 0.26 | 0.12 | T | 8 | 0.62 |
| 931 | 194 | 0 | 0 | 105 | 299 | 0.65 | 0.00 | 0.00 | 0.35 | A | 16 | 0.65 |
| 932 | 0 | 157 | 3 | 164 | 324 | 0.00 | 0.48 | 0.01 | 0.51 | C | 6 | 0.51 |
| 933 | 76 | 203 | 76 | 78 | 433 | 0.18 | 0.47 | 0.18 | 0.18 | N | 13 | 0.47 |
| 934 | 63 | 0 | 239 | 0 | 302 | 0.21 | 0.00 | 0.79 | 0.00 | G | 17 | 0.79 |
| 935 | 0 | 0 | 218 | 179 | 397 | 0.00 | 0.00 | 0.55 | 0.45 | G | 14 | 0.55 |
| 936 | 2 | 172 | 46 | 125 | 345 | 0.01 | 0.50 | 0.13 | 0.36 | T | 22 | 0.50 |
| 937 | 30 | 184 | 2 | 127 | 343 | 0.09 | 0.54 | 0.01 | 0.37 | T | 11 | 0.54 |
| 938 | 30 | 257 | 2 | 67 | 356 | 0.08 | 0.72 | 0.01 | 0.19 | T | 14 | 0.72 |
| 939 | 18 | 180 | 6 | 120 | 324 | 0.06 | 0.56 | 0.02 | 0.37 | T | 6 | 0.56 |
| 940 | 9 | 180 | 78 | 97 | 364 | 0.02 | 0.49 | 0.21 | 0.27 | T | 7 | 0.49 |
| 941 | 55 | 0 | 33 | 103 | 191 | 0.29 | 0.00 | 0.17 | 0.54 | C | 6 | 0.54 |
| 942 | 99 | 27 | 0 | 0 | 126 | 0.79 | 0.21 | 0.00 | 0.00 | A | 14 | 0.79 |
| 943 | 93 | 60 | 0 | 79 | 232 | 0.40 | 0.26 | 0.00 | 0.34 | A | 5 | 0.40 |
| 944 | 280 | 53 | 73 | 1 | 407 | 0.69 | 0.13 | 0.18 | 0.00 | A | 7 | 0.69 |
| 945 | 301 | 20 | 0 | 3 | 324 | 0.93 | 0.06 | 0.00 | 0.01 | A | 26 | 0.93 |
| 946 | 162 | 0 | 70 | 26 | 258 | 0.63 | 0.00 | 0.27 | 0.10 | A | 6 | 0.63 |
| 947 | 0 | 56 | 63 | 62 | 181 | 0.00 | 0.31 | 0.35 | 0.34 | G | 10 | 0.35 |
| 948 | 166 | 146 | 2 | 83 | 397 | 0.42 | 0.37 | 0.01 | 0.21 | A | 7 | 0.42 |
| 949 | 146 | 214 | 4 | 0 | 364 | 0.40 | 0.59 | 0.01 | 0.00 | T | 12 | 0.59 |
| 950 | 157 | 0 | 10 | 0 | 167 | 0.94 | 0.00 | 0.06 | 0.00 | A | 11 | 0.94 |
| 951 | 91 | 51 | 22 | 215 | 379 | 0.24 | 0.13 | 0.06 | 0.57 | C | 22 | 0.57 |
| 952 | 0 | 0 | 47 | 175 | 222 | 0.00 | 0.00 | 0.21 | 0.79 | C | 8 | 0.79 |
| 953 | 13 | 0 | 42 | 0 | 55 | 0.24 | 0.00 | 0.76 | 0.00 | G | 25 | 0.76 |
| 954 | 53 | 258 | 0 | 165 | 476 | 0.11 | 0.54 | 0.00 | 0.35 | T | 13 | 0.54 |
| 955 | 60 | 163 | 10 | 187 | 420 | 0.14 | 0.39 | 0.02 | 0.45 | C | 7 | 0.45 |
| 956 | 3 | 143 | 40 | 0 | 186 | 0.02 | 0.77 | 0.22 | 0.00 | T | 10 | 0.77 |
| 957 | 0 | 0 | 123 | 0 | 123 | 0.00 | 0.00 | 1.00 | 0.00 | G | 14 | 1.00 |
| 958 | 173 | 55 | 73 | 99 | 400 | 0.43 | 0.14 | 0.18 | 0.25 | N | 24 | 0.43 |
| 959 | 187 | 0 | 19 | 117 | 323 | 0.58 | 0.00 | 0.06 | 0.36 | A | 13 | 0.58 |
| 960 | 181 | 0 | 4 | 51 | 236 | 0.77 | 0.00 | 0.02 | 0.22 | A | 6 | 0.77 |
| 961 | 0 | 200 | 9 | 0 | 209 | 0.00 | 0.96 | 0.04 | 0.00 | T | 9 | 0.96 |
| 962 | 118 | 201 | 7 | 147 | 473 | 0.25 | 0.42 | 0.01 | 0.31 | T | 8 | 0.42 |
| 963 | 57 | 0 | 47 | 118 | 222 | 0.26 | 0.00 | 0.21 | 0.53 | C | 7 | 0.53 |
| 964 | 131 | 1 | 76 | 108 | 316 | 0.41 | 0.00 | 0.24 | 0.34 | A | 7 | 0.41 |
| 965 | 90 | 140 | 67 | 25 | 322 | 0.28 | 0.43 | 0.21 | 0.08 | T | 5 | 0.43 |
| 966 | 0 | 0 | 22 | 0 | 22 | 0.00 | 0.00 | 1.00 | 0.00 | G | 8 | 1.00 |
| 967 | 203 | 110 | 46 | 69 | 428 | 0.47 | 0.26 | 0.11 | 0.16 | A | 18 | 0.47 |
| 968 | 0 | 105 | 26 | 0 | 131 | 0.00 | 0.80 | 0.20 | 0.00 | T | 7 | 0.80 |
| 969 | 24 | 0 | 88 | 42 | 154 | 0.16 | 0.00 | 0.57 | 0.27 | G | 7 | 0.57 |
| 970 | 0 | 232 | 9 | 0 | 241 | 0.00 | 0.96 | 0.04 | 0.00 | T | 34 | 0.96 |
| 971 | 0 | 0 | 84 | 111 | 195 | 0.00 | 0.00 | 0.43 | 0.57 | C | 7 | 0.57 |
| 972 | 110 | 1 | 42 | 159 | 312 | 0.35 | 0.00 | 0.13 | 0.51 | C | 10 | 0.51 |
| 973 | 52 | 32 | 85 | 232 | 401 | 0.13 | 0.08 | 0.21 | 0.58 | C | 25 | 0.58 |
| 974 | 102 | 65 | 110 | 129 | 406 | 0.25 | 0.16 | 0.27 | 0.32 | N | 10 | 0.32 |
| 975 | 59 | 77 | 95 | 134 | 365 | 0.16 | 0.21 | 0.26 | 0.37 | N | 10 | 0.37 |
| 976 | 85 | 62 | 182 | 0 | 329 | 0.26 | 0.19 | 0.55 | 0.00 | G | 21 | 0.55 |
| 977 | 0 | 62 | 160 | 0 | 222 | 0.00 | 0.28 | 0.72 | 0.00 | G | 7 | 0.72 |
| 978 | 180 | 66 | 0 | 0 | 246 | 0.73 | 0.27 | 0.00 | 0.00 | A | 25 | 0.73 |
| 979 | 0 | 122 | 92 | 94 | 308 | 0.00 | 0.40 | 0.30 | 0.31 | T | 6 | 0.40 |
| 980 | 70 | 242 | 0 | 0 | 312 | 0.22 | 0.78 | 0.00 | 0.00 | T | 17 | 0.78 |
| 981 | 92 | 234 | 34 | 90 | 450 | 0.20 | 0.52 | 0.08 | 0.20 | T | 9 | 0.52 |
| 982 | 46 | 0 | 0 | 107 | 153 | 0.30 | 0.00 | 0.00 | 0.70 | C | 7 | 0.70 |
| 983 | 30 | 148 | 174 | 54 | 406 | 0.07 | 0.36 | 0.43 | 0.13 | G | 12 | 0.43 |
| 984 | 46 | 161 | 160 | 43 | 410 | 0.11 | 0.39 | 0.39 | 0.10 | N | 13 | 0.39 |
| 985 | 158 | 69 | 162 | 6 | 395 | 0.40 | 0.17 | 0.41 | 0.02 | G | 9 | 0.41 |
| 986 | 203 | 0 | 99 | 3 | 305 | 0.67 | 0.00 | 0.32 | 0.01 | A | 8 | 0.67 |
| 987 | 208 | 126 | 30 | 52 | 416 | 0.50 | 0.30 | 0.07 | 0.12 | A | 17 | 0.50 |
| 988 | 0 | 124 | 24 | 0 | 148 | 0.00 | 0.84 | 0.16 | 0.00 | T | 6 | 0.84 |
| 989 | 121 | 135 | 27 | 132 | 415 | 0.29 | 0.33 | 0.07 | 0.32 | T | 9 | 0.33 |
| 990 | 104 | 0 | 36 | 109 | 249 | 0.42 | 0.00 | 0.14 | 0.44 | C | 5 | 0.44 |
| 991 | 148 | 18 | 73 | 123 | 362 | 0.41 | 0.05 | 0.20 | 0.34 | A | 6 | 0.41 |
| 992 | 125 | 42 | 56 | 121 | 344 | 0.36 | 0.12 | 0.16 | 0.35 | N | 13 | 0.36 |
| 993 | 50 | 48 | 142 | 111 | 351 | 0.14 | 0.14 | 0.40 | 0.32 | N | 8 | 0.40 |
| 994 | 2 | 9 | 260 | 102 | 373 | 0.01 | 0.02 | 0.70 | 0.27 | G | 37 | 0.70 |
| 995 | 42 | 1 | 0 | 110 | 153 | 0.27 | 0.01 | 0.00 | 0.72 | C | 7 | 0.72 |
| 996 | 43 | 0 | 107 | 131 | 281 | 0.15 | 0.00 | 0.38 | 0.47 | C | 5 | 0.47 |
| 997 | 12 | 142 | 0 | 0 | 154 | 0.08 | 0.92 | 0.00 | 0.00 | T | 5 | 0.92 |
| 998 | 11 | 177 | 57 | 167 | 412 | 0.03 | 0.43 | 0.14 | 0.41 | T | 10 | 0.43 |
| 999 | 24 | 125 | 45 | 156 | 350 | 0.07 | 0.36 | 0.13 | 0.45 | C | 6 | 0.45 |
| 1000 | 83 | 0 | 41 | 184 | 308 | 0.27 | 0.00 | 0.13 | 0.60 | C | 5 | 0.60 |
| 1001 | 98 | 89 | 100 | 95 | 382 | 0.26 | 0.23 | 0.26 | 0.25 | N | 4 | 0.26 |
| 1002 | 79 | 106 | 64 | 76 | 325 | 0.24 | 0.33 | 0.20 | 0.23 | N | 6 | 0.33 |
| 1003 | 129 | 0 | 107 | 37 | 273 | 0.47 | 0.00 | 0.39 | 0.14 | A | 21 | 0.47 |
| 1004 | 0 | 0 | 93 | 49 | 142 | 0.00 | 0.00 | 0.65 | 0.35 | G | 7 | 0.65 |
| 1005 | 0 | 142 | 83 | 65 | 290 | 0.00 | 0.49 | 0.29 | 0.22 | T | 8 | 0.49 |
| 1006 | 26 | 44 | 103 | 192 | 365 | 0.07 | 0.12 | 0.28 | 0.53 | C | 9 | 0.53 |
| 1007 | 2 | 0 | 132 | 163 | 297 | 0.01 | 0.00 | 0.44 | 0.55 | C | 5 | 0.55 |
| 1008 | 0 | 92 | 89 | 128 | 309 | 0.00 | 0.30 | 0.29 | 0.41 | C | 4 | 0.41 |
| 1009 | 97 | 87 | 112 | 101 | 397 | 0.24 | 0.22 | 0.28 | 0.25 | N | 5 | 0.28 |
| 1010 | 0 | 95 | 63 | 0 | 158 | 0.00 | 0.60 | 0.40 | 0.00 | T | 11 | 0.60 |
| 1011 | 96 | 0 | 0 | 68 | 164 | 0.59 | 0.00 | 0.00 | 0.41 | A | 10 | 0.59 |
| 1012 | 148 | 60 | 0 | 74 | 282 | 0.52 | 0.21 | 0.00 | 0.26 | A | 21 | 0.52 |
| 1013 | 152 | 0 | 0 | 48 | 200 | 0.76 | 0.00 | 0.00 | 0.24 | A | 12 | 0.76 |
| 1014 | 98 | 57 | 163 | 97 | 415 | 0.24 | 0.14 | 0.39 | 0.23 | N | 12 | 0.39 |
| 1015 | 0 | 54 | 68 | 108 | 230 | 0.00 | 0.23 | 0.30 | 0.47 | C | 15 | 0.47 |
| 1016 | 109 | 54 | 41 | 79 | 283 | 0.39 | 0.19 | 0.14 | 0.28 | N | 9 | 0.39 |
| 1017 | 120 | 92 | 0 | 0 | 212 | 0.57 | 0.43 | 0.00 | 0.00 | A | 6 | 0.57 |
| 1018 | 118 | 0 | 2 | 147 | 267 | 0.44 | 0.00 | 0.01 | 0.55 | C | 6 | 0.55 |
| 1019 | 85 | 14 | 42 | 136 | 277 | 0.31 | 0.05 | 0.15 | 0.49 | C | 9 | 0.49 |
| 1020 | 88 | 0 | 68 | 75 | 231 | 0.38 | 0.00 | 0.29 | 0.32 | A | 7 | 0.38 |
| 1021 | 118 | 62 | 58 | 45 | 283 | 0.42 | 0.22 | 0.20 | 0.16 | N | 13 | 0.42 |
| 1022 | 79 | 103 | 92 | 53 | 327 | 0.24 | 0.31 | 0.28 | 0.16 | N | 6 | 0.31 |
| 1023 | 67 | 87 | 68 | 106 | 328 | 0.20 | 0.27 | 0.21 | 0.32 | N | 6 | 0.32 |
| 1024 | 15 | 0 | 146 | 101 | 262 | 0.06 | 0.00 | 0.56 | 0.39 | G | 5 | 0.56 |
| 1025 | 1 | 0 | 116 | 147 | 264 | 0.00 | 0.00 | 0.44 | 0.56 | C | 9 | 0.56 |
| 1026 | 5 | 91 | 96 | 118 | 310 | 0.02 | 0.29 | 0.31 | 0.38 | C | 9 | 0.38 |
| 1027 | 7 | 161 | 33 | 148 | 349 | 0.02 | 0.46 | 0.09 | 0.42 | T | 14 | 0.46 |
| 1028 | 12 | 72 | 40 | 153 | 277 | 0.04 | 0.26 | 0.14 | 0.55 | C | 9 | 0.55 |
| 1029 | 0 | 60 | 44 | 0 | 104 | 0.00 | 0.58 | 0.42 | 0.00 | T | 6 | 0.58 |
| 1030 | 145 | 0 | 26 | 43 | 214 | 0.68 | 0.00 | 0.12 | 0.20 | A | 23 | 0.68 |
| 1031 | 0 | 115 | 47 | 1 | 163 | 0.00 | 0.71 | 0.29 | 0.01 | T | 18 | 0.71 |
| 1032 | 125 | 0 | 0 | 0 | 125 | 1.00 | 0.00 | 0.00 | 0.00 | A | 10 | 1.00 |
| 1033 | 193 | 25 | 45 | 69 | 332 | 0.58 | 0.08 | 0.14 | 0.21 | A | 18 | 0.58 |
| 1034 | 0 | 52 | 55 | 104 | 211 | 0.00 | 0.25 | 0.26 | 0.49 | C | 6 | 0.49 |
| 1035 | 0 | 49 | 19 | 151 | 219 | 0.00 | 0.22 | 0.09 | 0.69 | C | 9 | 0.69 |
| 1036 | 122 | 164 | 4 | 0 | 290 | 0.42 | 0.57 | 0.01 | 0.00 | T | 8 | 0.57 |
| 1037 | 0 | 0 | 160 | 0 | 160 | 0.00 | 0.00 | 1.00 | 0.00 | G | 16 | 1.00 |
| 1038 | 88 | 2 | 30 | 0 | 120 | 0.73 | 0.02 | 0.25 | 0.00 | A | 6 | 0.73 |
| 1039 | 93 | 66 | 41 | 117 | 317 | 0.29 | 0.21 | 0.13 | 0.37 | N | 5 | 0.37 |
| 1040 | 0 | 0 | 39 | 115 | 154 | 0.00 | 0.00 | 0.25 | 0.75 | C | 13 | 0.75 |
| 1041 | 107 | 0 | 0 | 0 | 107 | 1.00 | 0.00 | 0.00 | 0.00 | A | 8 | 1.00 |
| 1042 | 0 | 75 | 92 | 95 | 262 | 0.00 | 0.29 | 0.35 | 0.36 | C | 6 | 0.36 |
| 1043 | 333 | 261 | 2 | 99 | 695 | 0.48 | 0.38 | 0.00 | 0.14 | A | 12 | 0.48 |
| 1044 | 192 | 0 | 103 | 86 | 381 | 0.50 | 0.00 | 0.27 | 0.23 | A | 11 | 0.50 |
| 1045 | 139 | 43 | 18 | 59 | 259 | 0.54 | 0.17 | 0.07 | 0.23 | A | 9 | 0.54 |
| 1046 | 90 | 67 | 37 | 88 | 282 | 0.32 | 0.24 | 0.13 | 0.31 | N | 5 | 0.32 |
| 1047 | 64 | 107 | 29 | 116 | 316 | 0.20 | 0.34 | 0.09 | 0.37 | N | 8 | 0.37 |
| 1048 | 48 | 74 | 67 | 113 | 302 | 0.16 | 0.25 | 0.22 | 0.37 | N | 8 | 0.37 |
| 1049 | 31 | 23 | 86 | 111 | 251 | 0.12 | 0.09 | 0.34 | 0.44 | C | 14 | 0.44 |
| 1050 | 32 | 3 | 134 | 111 | 280 | 0.11 | 0.01 | 0.48 | 0.40 | G | 13 | 0.48 |
| 1051 | 60 | 3 | 56 | 94 | 213 | 0.28 | 0.01 | 0.26 | 0.44 | C | 8 | 0.44 |
| 1052 | 78 | 33 | 15 | 115 | 241 | 0.32 | 0.14 | 0.06 | 0.48 | C | 15 | 0.48 |
| 1053 | 75 | 41 | 37 | 123 | 276 | 0.27 | 0.15 | 0.13 | 0.45 | N | 12 | 0.45 |
| 1054 | 76 | 57 | 2 | 110 | 245 | 0.31 | 0.23 | 0.01 | 0.45 | C | 9 | 0.45 |
| 1055 | 0 | 0 | 40 | 78 | 118 | 0.00 | 0.00 | 0.34 | 0.66 | C | 11 | 0.66 |
| 1056 | 0 | 84 | 52 | 60 | 196 | 0.00 | 0.43 | 0.27 | 0.31 | T | 9 | 0.43 |
| 1057 | 79 | 83 | 61 | 86 | 309 | 0.26 | 0.27 | 0.20 | 0.28 | N | 12 | 0.28 |
| 1058 | 86 | 69 | 29 | 87 | 271 | 0.32 | 0.25 | 0.11 | 0.32 | N | 5 | 0.32 |
| 1059 | 28 | 0 | 0 | 135 | 163 | 0.17 | 0.00 | 0.00 | 0.83 | C | 5 | 0.83 |
| 1060 | 58 | 70 | 0 | 135 | 263 | 0.22 | 0.27 | 0.00 | 0.51 | C | 9 | 0.51 |
| 1061 | 78 | 72 | 1 | 111 | 262 | 0.30 | 0.27 | 0.00 | 0.42 | C | 5 | 0.42 |
| 1062 | 84 | 90 | 24 | 62 | 260 | 0.32 | 0.35 | 0.09 | 0.24 | N | 5 | 0.35 |
| 1063 | 66 | 0 | 53 | 47 | 166 | 0.40 | 0.00 | 0.32 | 0.28 | A | 6 | 0.40 |
| 1064 | 0 | 112 | 89 | 0 | 201 | 0.00 | 0.56 | 0.44 | 0.00 | T | 7 | 0.56 |
| 1065 | 78 | 125 | 0 | 38 | 241 | 0.32 | 0.52 | 0.00 | 0.16 | T | 9 | 0.52 |
| 1066 | 63 | 109 | 70 | 44 | 286 | 0.22 | 0.38 | 0.24 | 0.15 | N | 16 | 0.38 |
| 1067 | 45 | 109 | 67 | 84 | 305 | 0.15 | 0.36 | 0.22 | 0.28 | N | 7 | 0.36 |
| 1068 | 47 | 0 | 28 | 119 | 194 | 0.24 | 0.00 | 0.14 | 0.61 | C | 27 | 0.61 |
| 1069 | 50 | 0 | 0 | 119 | 169 | 0.30 | 0.00 | 0.00 | 0.70 | C | 7 | 0.70 |
| 1070 | 30 | 6 | 65 | 108 | 209 | 0.14 | 0.03 | 0.31 | 0.52 | C | 3 | 0.52 |
| 1071 | 18 | 24 | 102 | 60 | 204 | 0.09 | 0.12 | 0.50 | 0.29 | G | 4 | 0.50 |
| 1072 | 12 | 43 | 126 | 59 | 240 | 0.05 | 0.18 | 0.52 | 0.25 | G | 3 | 0.52 |
| 1073 | 30 | 43 | 58 | 29 | 160 | 0.19 | 0.27 | 0.36 | 0.18 | N | 4 | 0.36 |
| 1074 | 70 | 43 | 75 | 6 | 194 | 0.36 | 0.22 | 0.39 | 0.03 | G | 5 | 0.39 |
| 1075 | 47 | 50 | 52 | 5 | 154 | 0.31 | 0.32 | 0.34 | 0.03 | G | 11 | 0.34 |
| 1076 | 0 | 38 | 80 | 9 | 127 | 0.00 | 0.30 | 0.63 | 0.07 | G | 16 | 0.63 |
| 1077 | 60 | 27 | 76 | 1 | 164 | 0.37 | 0.16 | 0.46 | 0.01 | G | 17 | 0.46 |
| 1078 | 76 | 39 | 54 | 14 | 183 | 0.42 | 0.21 | 0.30 | 0.08 | A | 10 | 0.42 |
| 1079 | 64 | 0 | 67 | 60 | 191 | 0.34 | 0.00 | 0.35 | 0.31 | G | 9 | 0.35 |
| 1080 | 58 | 11 | 2 | 88 | 159 | 0.36 | 0.07 | 0.01 | 0.55 | C | 19 | 0.55 |
| 1081 | 38 | 3 | 16 | 93 | 150 | 0.25 | 0.02 | 0.11 | 0.62 | C | 15 | 0.62 |
| 1082 | 59 | 4 | 2 | 75 | 140 | 0.42 | 0.03 | 0.01 | 0.54 | C | 6 | 0.54 |
| 1083 | 51 | 0 | 29 | 100 | 180 | 0.28 | 0.00 | 0.16 | 0.56 | C | 6 | 0.56 |
| 1084 | 27 | 4 | 60 | 77 | 168 | 0.16 | 0.02 | 0.36 | 0.46 | C | 11 | 0.46 |
| 1085 | 27 | 14 | 77 | 46 | 164 | 0.16 | 0.09 | 0.47 | 0.28 | G | 8 | 0.47 |
| 1086 | 41 | 0 | 59 | 0 | 100 | 0.41 | 0.00 | 0.59 | 0.00 | G | 4 | 0.59 |
| 1087 | 25 | 23 | 125 | 28 | 201 | 0.12 | 0.11 | 0.62 | 0.14 | G | 18 | 0.62 |
| 1088 | 48 | 0 | 92 | 36 | 176 | 0.27 | 0.00 | 0.52 | 0.20 | G | 5 | 0.52 |
| 1089 | 41 | 5 | 26 | 68 | 140 | 0.29 | 0.04 | 0.19 | 0.49 | C | 3 | 0.49 |
| 1090 | 2 | 17 | 36 | 115 | 170 | 0.01 | 0.10 | 0.21 | 0.68 | C | 5 | 0.68 |
| 1091 | 0 | 70 | 0 | 110 | 180 | 0.00 | 0.39 | 0.00 | 0.61 | C | 3 | 0.61 |
| 1092 | 1 | 75 | 115 | 87 | 278 | 0.00 | 0.27 | 0.41 | 0.31 | G | 3 | 0.41 |
| 1093 | 10 | 99 | 115 | 42 | 266 | 0.04 | 0.37 | 0.43 | 0.16 | G | 3 | 0.43 |
| 1094 | 1 | 106 | 98 | 22 | 227 | 0.00 | 0.47 | 0.43 | 0.10 | T | 4 | 0.47 |
| 1095 | 23 | 133 | 0 | 28 | 184 | 0.12 | 0.72 | 0.00 | 0.15 | T | 4 | 0.72 |
| 1096 | 55 | 105 | 91 | 1 | 252 | 0.22 | 0.42 | 0.36 | 0.00 | T | 12 | 0.42 |
| 1097 | 64 | 0 | 86 | 1 | 151 | 0.42 | 0.00 | 0.57 | 0.01 | G | 16 | 0.57 |
| 1098 | 141 | 54 | 59 | 2 | 256 | 0.55 | 0.21 | 0.23 | 0.01 | A | 13 | 0.55 |
| 1099 | 158 | 16 | 41 | 2 | 217 | 0.73 | 0.07 | 0.19 | 0.01 | A | 32 | 0.73 |
| 1100 | 166 | 2 | 0 | 33 | 201 | 0.83 | 0.01 | 0.00 | 0.16 | A | 38 | 0.83 |
| 1101 | 128 | 18 | 20 | 47 | 213 | 0.60 | 0.08 | 0.09 | 0.22 | A | 10 | 0.60 |
| 1102 | 103 | 16 | 0 | 96 | 215 | 0.48 | 0.07 | 0.00 | 0.45 | A | 10 | 0.48 |
| 1103 | 67 | 53 | 14 | 86 | 220 | 0.30 | 0.24 | 0.06 | 0.39 | C | 4 | 0.39 |
| 1104 | 64 | 22 | 17 | 81 | 184 | 0.35 | 0.12 | 0.09 | 0.44 | C | 6 | 0.44 |
| 1105 | 0 | 48 | 20 | 69 | 137 | 0.00 | 0.35 | 0.15 | 0.50 | C | 4 | 0.50 |
| 1106 | 71 | 69 | 31 | 41 | 212 | 0.33 | 0.33 | 0.15 | 0.19 | N | 5 | 0.33 |
| 1107 | 55 | 0 | 46 | 11 | 112 | 0.49 | 0.00 | 0.41 | 0.10 | A | 6 | 0.49 |
| 1108 | 59 | 111 | 41 | 9 | 220 | 0.27 | 0.50 | 0.19 | 0.04 | T | 11 | 0.50 |
| 1109 | 3 | 0 | 2 | 3 | 8 | 0.38 | 0.00 | 0.25 | 0.38 | A | 26 | 0.38 |
| 1110 | 10 | 201 | 20 | 0 | 231 | 0.04 | 0.87 | 0.09 | 0.00 | T | 21 | 0.87 |
| 1111 | 35 | 196 | 50 | 0 | 281 | 0.12 | 0.70 | 0.18 | 0.00 | T | 20 | 0.70 |
| 1112 | 1 | 179 | 38 | 8 | 226 | 0.00 | 0.79 | 0.17 | 0.04 | T | 9 | 0.79 |
| 1113 | 0 | 0 | 85 | 31 | 116 | 0.00 | 0.00 | 0.73 | 0.27 | G | 7 | 0.73 |
| 1114 | 5 | 146 | 0 | 30 | 181 | 0.03 | 0.81 | 0.00 | 0.17 | T | 4 | 0.81 |
| 1115 | 67 | 113 | 61 | 0 | 241 | 0.28 | 0.47 | 0.25 | 0.00 | T | 5 | 0.47 |
| 1116 | 0 | 83 | 0 | 58 | 141 | 0.00 | 0.59 | 0.00 | 0.41 | T | 3 | 0.59 |
| 1117 | 75 | 48 | 72 | 62 | 257 | 0.29 | 0.19 | 0.28 | 0.24 | N | 5 | 0.29 |
| 1118 | 99 | 0 | 55 | 61 | 215 | 0.46 | 0.00 | 0.26 | 0.28 | A | 6 | 0.46 |
| 1119 | 89 | 8 | 81 | 66 | 244 | 0.36 | 0.03 | 0.33 | 0.27 | A | 6 | 0.36 |
| 1120 | 129 | 0 | 37 | 12 | 178 | 0.72 | 0.00 | 0.21 | 0.07 | A | 10 | 0.72 |
| 1121 | 151 | 0 | 0 | 30 | 181 | 0.83 | 0.00 | 0.00 | 0.17 | A | 20 | 0.83 |
| 1122 | 119 | 0 | 99 | 28 | 246 | 0.48 | 0.00 | 0.40 | 0.11 | A | 9 | 0.48 |
| 1123 | 132 | 0 | 0 | 47 | 179 | 0.74 | 0.00 | 0.00 | 0.26 | A | 6 | 0.74 |
| 1124 | 86 | 1 | 92 | 42 | 221 | 0.39 | 0.00 | 0.42 | 0.19 | G | 5 | 0.42 |
| 1125 | 109 | 2 | 0 | 17 | 128 | 0.85 | 0.02 | 0.00 | 0.13 | A | 7 | 0.85 |
| 1126 | 0 | 0 | 81 | 25 | 106 | 0.00 | 0.00 | 0.76 | 0.24 | G | 8 | 0.76 |
| 1127 | 138 | 19 | 70 | 34 | 261 | 0.53 | 0.07 | 0.27 | 0.13 | A | 15 | 0.53 |
| 1128 | 118 | 33 | 79 | 51 | 281 | 0.42 | 0.12 | 0.28 | 0.18 | N | 7 | 0.42 |
| 1129 | 100 | 63 | 133 | 40 | 336 | 0.30 | 0.19 | 0.40 | 0.12 | N | 5 | 0.40 |
| 1130 | 73 | 0 | 157 | 37 | 267 | 0.27 | 0.00 | 0.59 | 0.14 | G | 4 | 0.59 |
| 1131 | 48 | 56 | 168 | 0 | 272 | 0.18 | 0.21 | 0.62 | 0.00 | G | 9 | 0.62 |
| 1132 | 27 | 63 | 155 | 50 | 295 | 0.09 | 0.21 | 0.53 | 0.17 | G | 4 | 0.53 |
| 1133 | 7 | 54 | 167 | 75 | 303 | 0.02 | 0.18 | 0.55 | 0.25 | G | 7 | 0.55 |
| 1134 | 10 | 43 | 149 | 85 | 287 | 0.03 | 0.15 | 0.52 | 0.30 | G | 4 | 0.52 |
| 1135 | 1 | 43 | 90 | 117 | 251 | 0.00 | 0.17 | 0.36 | 0.47 | C | 5 | 0.47 |
| 1136 | 11 | 0 | 82 | 97 | 190 | 0.06 | 0.00 | 0.43 | 0.51 | C | 10 | 0.51 |
| 1137 | 35 | 56 | 0 | 134 | 225 | 0.16 | 0.25 | 0.00 | 0.60 | C | 7 | 0.60 |
| 1138 | 55 | 26 | 76 | 112 | 269 | 0.20 | 0.10 | 0.28 | 0.42 | C | 9 | 0.42 |
| 1139 | 0 | 26 | 68 | 110 | 204 | 0.00 | 0.13 | 0.33 | 0.54 | C | 15 | 0.54 |
| 1140 | 59 | 27 | 40 | 126 | 252 | 0.23 | 0.11 | 0.16 | 0.50 | C | 4 | 0.50 |
| 1141 | 36 | 19 | 75 | 122 | 252 | 0.14 | 0.08 | 0.30 | 0.48 | C | 12 | 0.48 |
| 1142 | 35 | 1 | 65 | 0 | 101 | 0.35 | 0.01 | 0.64 | 0.00 | G | 4 | 0.64 |
| 1143 | 84 | 8 | 51 | 150 | 293 | 0.29 | 0.03 | 0.17 | 0.51 | C | 4 | 0.51 |
| 1144 | 27 | 9 | 76 | 156 | 268 | 0.10 | 0.03 | 0.28 | 0.58 | C | 11 | 0.58 |
| 1145 | 8 | 13 | 85 | 172 | 278 | 0.03 | 0.05 | 0.31 | 0.62 | C | 7 | 0.62 |
| 1146 | 36 | 33 | 40 | 135 | 244 | 0.15 | 0.14 | 0.16 | 0.55 | C | 11 | 0.55 |
| 1147 | 85 | 37 | 38 | 84 | 244 | 0.35 | 0.15 | 0.16 | 0.34 | N | 5 | 0.35 |
| 1148 | 100 | 49 | 23 | 76 | 248 | 0.40 | 0.20 | 0.09 | 0.31 | A | 11 | 0.40 |
| 1149 | 78 | 39 | 23 | 97 | 237 | 0.33 | 0.16 | 0.10 | 0.41 | C | 9 | 0.41 |
| 1150 | 76 | 57 | 21 | 75 | 229 | 0.33 | 0.25 | 0.09 | 0.33 | N | 7 | 0.33 |
| 1151 | 120 | 64 | 44 | 58 | 286 | 0.42 | 0.22 | 0.15 | 0.20 | N | 9 | 0.42 |
| 1152 | 118 | 80 | 3 | 82 | 283 | 0.42 | 0.28 | 0.01 | 0.29 | A | 5 | 0.42 |
| 1153 | 0 | 63 | 28 | 24 | 115 | 0.00 | 0.55 | 0.24 | 0.21 | T | 6 | 0.55 |
| 1154 | 154 | 67 | 2 | 16 | 239 | 0.64 | 0.28 | 0.01 | 0.07 | A | 16 | 0.64 |
| 1155 | 0 | 46 | 11 | 9 | 66 | 0.00 | 0.70 | 0.17 | 0.14 | T | 5 | 0.70 |
| 1156 | 155 | 38 | 25 | 2 | 220 | 0.70 | 0.17 | 0.11 | 0.01 | A | 21 | 0.70 |
| 1157 | 144 | 11 | 48 | 9 | 212 | 0.68 | 0.05 | 0.23 | 0.04 | A | 2 | 0.68 |
| 1158 | 133 | 0 | 19 | 13 | 165 | 0.81 | 0.00 | 0.12 | 0.08 | A | 1 | 0.81 |
| 1159 | 124 | 0 | 32 | 1 | 157 | 0.79 | 0.00 | 0.20 | 0.01 | A | 2 | 0.79 |
| 1160 | 128 | 11 | 33 | 20 | 192 | 0.67 | 0.06 | 0.17 | 0.10 | A | 5 | 0.67 |
| 1161 | 108 | 37 | 46 | 31 | 222 | 0.49 | 0.17 | 0.21 | 0.14 | N | 11 | 0.49 |
| 1162 | 113 | 35 | 33 | 52 | 233 | 0.48 | 0.15 | 0.14 | 0.22 | N | 4 | 0.48 |
| 1163 | 77 | 44 | 63 | 2 | 186 | 0.41 | 0.24 | 0.34 | 0.01 | A | 4 | 0.41 |
| 1164 | 66 | 49 | 21 | 21 | 157 | 0.42 | 0.31 | 0.13 | 0.13 | N | 12 | 0.42 |
| 1165 | 52 | 38 | 30 | 48 | 168 | 0.31 | 0.23 | 0.18 | 0.29 | N | 5 | 0.31 |
| 1166 | 35 | 31 | 78 | 68 | 212 | 0.17 | 0.15 | 0.37 | 0.32 | N | 4 | 0.37 |
| 1167 | 0 | 24 | 0 | 0 | 24 | 0.00 | 1.00 | 0.00 | 0.00 | T | 7 | 1.00 |
| 1168 | 26 | 24 | 50 | 79 | 179 | 0.15 | 0.13 | 0.28 | 0.44 | N | 3 | 0.44 |
| 1169 | 72 | 18 | 62 | 109 | 261 | 0.28 | 0.07 | 0.24 | 0.42 | C | 18 | 0.42 |
| 1170 | 70 | 5 | 55 | 77 | 207 | 0.34 | 0.02 | 0.27 | 0.37 | C | 4 | 0.37 |
| 1171 | 44 | 3 | 0 | 57 | 104 | 0.42 | 0.03 | 0.00 | 0.55 | C | 7 | 0.55 |
| 1172 | 83 | 7 | 51 | 38 | 179 | 0.46 | 0.04 | 0.28 | 0.21 | A | 5 | 0.46 |
| 1173 | 152 | 22 | 47 | 36 | 257 | 0.59 | 0.09 | 0.18 | 0.14 | A | 3 | 0.59 |
| 1174 | 169 | 4 | 31 | 53 | 257 | 0.66 | 0.02 | 0.12 | 0.21 | A | 2 | 0.66 |
| 1175 | 144 | 0 | 0 | 19 | 163 | 0.88 | 0.00 | 0.00 | 0.12 | A | 2 | 0.88 |
| 1176 | 0 | 4 | 25 | 37 | 66 | 0.00 | 0.06 | 0.38 | 0.56 | C | 3 | 0.56 |
| 1177 | 133 | 2 | 35 | 28 | 198 | 0.67 | 0.01 | 0.18 | 0.14 | A | 4 | 0.67 |
| 1178 | 172 | 21 | 26 | 26 | 245 | 0.70 | 0.09 | 0.11 | 0.11 | A | 14 | 0.70 |
| 1179 | 109 | 25 | 34 | 35 | 203 | 0.54 | 0.12 | 0.17 | 0.17 | A | 5 | 0.54 |
| 1180 | 84 | 13 | 85 | 47 | 229 | 0.37 | 0.06 | 0.37 | 0.21 | G | 5 | 0.37 |
| 1181 | 95 | 7 | 51 | 44 | 197 | 0.48 | 0.04 | 0.26 | 0.22 | A | 4 | 0.48 |
| 1182 | 79 | 11 | 85 | 39 | 214 | 0.37 | 0.05 | 0.40 | 0.18 | G | 3 | 0.40 |
| 1183 | 116 | 11 | 50 | 16 | 193 | 0.60 | 0.06 | 0.26 | 0.08 | A | 3 | 0.60 |
| 1184 | 134 | 10 | 67 | 15 | 226 | 0.59 | 0.04 | 0.30 | 0.07 | A | 15 | 0.59 |
| 1185 | 155 | 15 | 79 | 0 | 249 | 0.62 | 0.06 | 0.32 | 0.00 | A | 6 | 0.62 |
| 1186 | 0 | 6 | 0 | 3 | 9 | 0.00 | 0.67 | 0.00 | 0.33 | T | 8 | 0.67 |
| 1187 | 146 | 2 | 64 | 42 | 254 | 0.57 | 0.01 | 0.25 | 0.17 | A | 9 | 0.57 |
| 1188 | 134 | 0 | 108 | 34 | 276 | 0.49 | 0.00 | 0.39 | 0.12 | A | 4 | 0.49 |
| 1189 | 80 | 1 | 85 | 71 | 237 | 0.34 | 0.00 | 0.36 | 0.30 | G | 1 | 0.36 |
| 1190 | 51 | 14 | 74 | 60 | 199 | 0.26 | 0.07 | 0.37 | 0.30 | G | 5 | 0.37 |
| 1191 | 50 | 26 | 58 | 84 | 218 | 0.23 | 0.12 | 0.27 | 0.39 | N | 7 | 0.39 |
| 1192 | 0 | 26 | 0 | 0 | 26 | 0.00 | 1.00 | 0.00 | 0.00 | T | 4 | 1.00 |
| 1193 | 43 | 0 | 117 | 82 | 242 | 0.18 | 0.00 | 0.48 | 0.34 | G | 3 | 0.48 |
| 1194 | 27 | 30 | 83 | 63 | 203 | 0.13 | 0.15 | 0.41 | 0.31 | N | 1 | 0.41 |
| 1195 | 73 | 35 | 102 | 69 | 279 | 0.26 | 0.13 | 0.37 | 0.25 | N | 1 | 0.37 |
| 1196 | 0 | 0 | 74 | 85 | 159 | 0.00 | 0.00 | 0.47 | 0.53 | C | 2 | 0.53 |
| 1197 | 83 | 17 | 49 | 68 | 217 | 0.38 | 0.08 | 0.23 | 0.31 | A | 4 | 0.38 |
| 1198 | 71 | 32 | 63 | 93 | 259 | 0.27 | 0.12 | 0.24 | 0.36 | N | 3 | 0.36 |
| 1199 | 92 | 49 | 32 | 81 | 254 | 0.36 | 0.19 | 0.13 | 0.32 | N | 1 | 0.36 |
| 1200 | 0 | 0 | 0 | 81 | 81 | 0.00 | 0.00 | 0.00 | 1.00 | C | 5 | 1.00 |
| 1201 | 0 | 59 | 35 | 0 | 94 | 0.00 | 0.63 | 0.37 | 0.00 | T | 5 | 0.63 |
| 1202 | 86 | 54 | 21 | 68 | 229 | 0.38 | 0.24 | 0.09 | 0.30 | A | 10 | 0.38 |
| 1203 | 84 | 70 | 40 | 45 | 239 | 0.35 | 0.29 | 0.17 | 0.19 | N | 10 | 0.35 |
| 1204 | 55 | 61 | 27 | 42 | 185 | 0.30 | 0.33 | 0.15 | 0.23 | N | 11 | 0.33 |
| 1205 | 39 | 68 | 75 | 60 | 242 | 0.16 | 0.28 | 0.31 | 0.25 | N | 8 | 0.31 |
| 1206 | 65 | 59 | 67 | 49 | 240 | 0.27 | 0.25 | 0.28 | 0.20 | N | 7 | 0.28 |
| 1207 | 67 | 22 | 84 | 79 | 252 | 0.27 | 0.09 | 0.33 | 0.31 | N | 8 | 0.33 |
| 1208 | 78 | 41 | 26 | 71 | 216 | 0.36 | 0.19 | 0.12 | 0.33 | N | 13 | 0.36 |
| 1209 | 68 | 26 | 36 | 76 | 206 | 0.33 | 0.13 | 0.17 | 0.37 | N | 6 | 0.37 |
| 1210 | 80 | 25 | 40 | 82 | 227 | 0.35 | 0.11 | 0.18 | 0.36 | N | 15 | 0.36 |
| 1211 | 56 | 18 | 31 | 0 | 105 | 0.53 | 0.17 | 0.30 | 0.00 | A | 3 | 0.53 |
| 1212 | 117 | 310 | 0 | 181 | 608 | 0.19 | 0.51 | 0.00 | 0.30 | T | 4 | 0.51 |
| 1213 | 0 | 16 | 580 | 119 | 715 | 0.00 | 0.02 | 0.81 | 0.17 | G | 6 | 0.81 |
| 1214 | 17 | 21 | 108 | 131 | 277 | 0.06 | 0.08 | 0.39 | 0.47 | C | 3 | 0.47 |
| 1215 | 1 | 8 | 109 | 153 | 271 | 0.00 | 0.03 | 0.40 | 0.56 | C | 2 | 0.56 |
| 1216 | 50 | 22 | 107 | 103 | 282 | 0.18 | 0.08 | 0.38 | 0.37 | G | 2 | 0.38 |
| 1217 | 62 | 0 | 71 | 106 | 239 | 0.26 | 0.00 | 0.30 | 0.44 | C | 5 | 0.44 |
| 1218 | 70 | 0 | 0 | 95 | 165 | 0.42 | 0.00 | 0.00 | 0.58 | C | 4 | 0.58 |
| 1219 | 85 | 0 | 115 | 138 | 338 | 0.25 | 0.00 | 0.34 | 0.41 | C | 6 | 0.41 |
| 1220 | 90 | 11 | 41 | 149 | 291 | 0.31 | 0.04 | 0.14 | 0.51 | C | 3 | 0.51 |
| 1221 | 83 | 26 | 51 | 96 | 256 | 0.32 | 0.10 | 0.20 | 0.38 | N | 2 | 0.38 |
| 1222 | 91 | 15 | 46 | 110 | 262 | 0.35 | 0.06 | 0.18 | 0.42 | C | 2 | 0.42 |
| 1223 | 100 | 33 | 0 | 91 | 224 | 0.45 | 0.15 | 0.00 | 0.41 | A | 6 | 0.45 |
| 1224 | 91 | 15 | 69 | 101 | 276 | 0.33 | 0.05 | 0.25 | 0.37 | C | 4 | 0.37 |
| 1225 | 70 | 20 | 68 | 97 | 255 | 0.27 | 0.08 | 0.27 | 0.38 | C | 3 | 0.38 |
| 1226 | 92 | 20 | 84 | 87 | 283 | 0.33 | 0.07 | 0.30 | 0.31 | A | 2 | 0.33 |
| 1227 | 64 | 27 | 54 | 87 | 232 | 0.28 | 0.12 | 0.23 | 0.38 | N | 2 | 0.38 |
| 1228 | 93 | 34 | 57 | 98 | 282 | 0.33 | 0.12 | 0.20 | 0.35 | N | 3 | 0.35 |
| 1229 | 124 | 7 | 16 | 75 | 222 | 0.56 | 0.03 | 0.07 | 0.34 | A | 3 | 0.56 |
| 1230 | 123 | 5 | 59 | 61 | 248 | 0.50 | 0.02 | 0.24 | 0.25 | A | 3 | 0.50 |
| 1231 | 109 | 58 | 53 | 77 | 297 | 0.37 | 0.20 | 0.18 | 0.26 | N | 1 | 0.37 |
| 1232 | 109 | 107 | 44 | 12 | 272 | 0.40 | 0.39 | 0.16 | 0.04 | A | 1 | 0.40 |
| 1233 | 0 | 0 | 50 | 0 | 50 | 0.00 | 0.00 | 1.00 | 0.00 | G | 3 | 1.00 |
| 1234 | 101 | 97 | 33 | 0 | 231 | 0.44 | 0.42 | 0.14 | 0.00 | A | 4 | 0.44 |
| 1235 | 91 | 91 | 57 | 21 | 260 | 0.35 | 0.35 | 0.22 | 0.08 | A | 4 | 0.35 |
| 1236 | 71 | 90 | 73 | 11 | 245 | 0.29 | 0.37 | 0.30 | 0.04 | T | 1 | 0.37 |
| 1237 | 88 | 80 | 110 | 63 | 341 | 0.26 | 0.23 | 0.32 | 0.18 | N | 6 | 0.32 |
| 1238 | 75 | 55 | 92 | 53 | 275 | 0.27 | 0.20 | 0.33 | 0.19 | N | 5 | 0.33 |
| 1239 | 97 | 45 | 68 | 45 | 255 | 0.38 | 0.18 | 0.27 | 0.18 | N | 9 | 0.38 |
| 1240 | 94 | 43 | 51 | 67 | 255 | 0.37 | 0.17 | 0.20 | 0.26 | N | 6 | 0.37 |
| 1241 | 101 | 23 | 28 | 74 | 226 | 0.45 | 0.10 | 0.12 | 0.33 | A | 8 | 0.45 |
| 1242 | 84 | 59 | 25 | 82 | 250 | 0.34 | 0.24 | 0.10 | 0.33 | N | 4 | 0.34 |
| 1243 | 86 | 83 | 46 | 42 | 257 | 0.33 | 0.32 | 0.18 | 0.16 | N | 5 | 0.33 |
| 1244 | 65 | 70 | 76 | 17 | 228 | 0.29 | 0.31 | 0.33 | 0.07 | G | 4 | 0.33 |
| 1245 | 92 | 75 | 18 | 32 | 217 | 0.42 | 0.35 | 0.08 | 0.15 | A | 9 | 0.42 |
| 1246 | 88 | 46 | 23 | 24 | 181 | 0.49 | 0.25 | 0.13 | 0.13 | N | 14 | 0.49 |
| 1247 | 113 | 57 | 1 | 25 | 196 | 0.58 | 0.29 | 0.01 | 0.13 | A | 8 | 0.58 |
| 1248 | 105 | 67 | 17 | 0 | 189 | 0.56 | 0.35 | 0.09 | 0.00 | A | 13 | 0.56 |
| 1249 | 115 | 59 | 48 | 53 | 275 | 0.42 | 0.21 | 0.17 | 0.19 | N | 15 | 0.42 |
| 1250 | 115 | 82 | 54 | 65 | 316 | 0.36 | 0.26 | 0.17 | 0.21 | N | 4 | 0.36 |
| 1251 | 68 | 0 | 8 | 74 | 150 | 0.45 | 0.00 | 0.05 | 0.49 | C | 9 | 0.49 |
| 1252 | 62 | 91 | 23 | 75 | 251 | 0.25 | 0.36 | 0.09 | 0.30 | N | 3 | 0.36 |
| 1253 | 92 | 98 | 57 | 49 | 296 | 0.31 | 0.33 | 0.19 | 0.17 | N | 2 | 0.33 |
| 1254 | 83 | 79 | 30 | 47 | 239 | 0.35 | 0.33 | 0.13 | 0.20 | N | 1 | 0.35 |
| 1255 | 74 | 73 | 81 | 48 | 276 | 0.27 | 0.26 | 0.29 | 0.17 | N | 3 | 0.29 |
| 1256 | 92 | 66 | 53 | 53 | 264 | 0.35 | 0.25 | 0.20 | 0.20 | N | 4 | 0.35 |
| 1257 | 78 | 48 | 51 | 25 | 202 | 0.39 | 0.24 | 0.25 | 0.12 | N | 11 | 0.39 |
| 1258 | 83 | 61 | 74 | 53 | 271 | 0.31 | 0.23 | 0.27 | 0.20 | N | 4 | 0.31 |
| 1259 | 0 | 39 | 0 | 39 | 78 | 0.00 | 0.50 | 0.00 | 0.50 | C | 6 | 0.50 |
| 1260 | 48 | 49 | 93 | 0 | 190 | 0.25 | 0.26 | 0.49 | 0.00 | G | 5 | 0.49 |
| 1261 | 46 | 0 | 116 | 27 | 189 | 0.24 | 0.00 | 0.61 | 0.14 | G | 6 | 0.61 |
| 1262 | 58 | 53 | 98 | 47 | 256 | 0.23 | 0.21 | 0.38 | 0.18 | N | 12 | 0.38 |
| 1263 | 63 | 51 | 84 | 14 | 212 | 0.30 | 0.24 | 0.40 | 0.07 | G | 4 | 0.40 |
| 1264 | 94 | 39 | 84 | 13 | 230 | 0.41 | 0.17 | 0.37 | 0.06 | A | 4 | 0.41 |
| 1265 | 60 | 38 | 94 | 28 | 220 | 0.27 | 0.17 | 0.43 | 0.13 | N | 4 | 0.43 |
| 1266 | 49 | 0 | 67 | 41 | 157 | 0.31 | 0.00 | 0.43 | 0.26 | G | 4 | 0.43 |
| 1267 | 80 | 55 | 61 | 8 | 204 | 0.39 | 0.27 | 0.30 | 0.04 | A | 4 | 0.39 |
| 1268 | 48 | 63 | 86 | 11 | 208 | 0.23 | 0.30 | 0.41 | 0.05 | G | 11 | 0.41 |
| 1269 | 58 | 67 | 59 | 29 | 213 | 0.27 | 0.31 | 0.28 | 0.14 | N | 6 | 0.31 |
| 1270 | 48 | 46 | 141 | 53 | 288 | 0.17 | 0.16 | 0.49 | 0.18 | N | 4 | 0.49 |
| 1271 | 22 | 47 | 93 | 58 | 220 | 0.10 | 0.21 | 0.42 | 0.26 | G | 9 | 0.42 |
| 1272 | 50 | 14 | 168 | 54 | 286 | 0.17 | 0.05 | 0.59 | 0.19 | G | 14 | 0.59 |
| 1273 | 31 | 12 | 169 | 58 | 270 | 0.11 | 0.04 | 0.63 | 0.21 | G | 1 | 0.63 |
| 1274 | 21 | 16 | 159 | 65 | 261 | 0.08 | 0.06 | 0.61 | 0.25 | G | 1 | 0.61 |
| 1275 | 0 | 0 | 137 | 0 | 137 | 0.00 | 0.00 | 1.00 | 0.00 | G | 2 | 1.00 |
Trimming thresholds :
| Raw sequence information | Values |
|---|---|
| Raw sequence length : | 1275 bp |
| Mean of raw sequence Phred quality scores : | 12.65 |
| Quality report - Trimmed sequence information | Values |
|---|---|
| Trimmed sequence length : | 745 bp |
| Trimmed sequence start position : | 24 |
| Trimmed sequence end position : | 769 |
| Mean of trimmed sequence Phred quality scores : | 14.48 |
Trimming thresholds :
| Raw sequence information | Values |
|---|---|
| Raw sequence length : | 1275 bp |
| Mean of raw sequence primary peak ratios : | 0.61 |
| Percentage of non-mixed positions on raw sequence : | 22.2 % |
| Mixed peak report - Trimmed sequence information | Values |
|---|---|
| Trimmed sequence length : | 901 bp |
| Trimmed sequence start position : | 10 |
| Trimmed sequence end position : | 910 |
| Mean of trimmed sequence primary peak ratios : | 0.64 |
| Percentage of non-mixed positions on trimmed sequence : | 26.42 % |
Warning: Trimmed sequence from the sequencing result #1 was found with insufficient length or insufficient quality and will not be used.
| Final trimmed sequence information | Values |
|---|---|
| Length : | 746 bp |
| Start position : | 24 |
| End position : | 769 |
| Mean of Phred quality scores : | 14.51 |
| Mean of primary peak ratio : | 0.62 |
| Percentage of non-mixed positions : | 22.39 % |
Sequence of primary peaks:
Length: 229 bp
## CAATTAAATTCCTATAACCCTCTAACCTAAAATTACTAAACCCTTTAGTGAGGGTTAATTACAACCCCCCATACCACTAATTAACTAAAAATTCACCTACCAACCACAACCAATCAACAACACAAACCCCTCCCCAAAACAAAACTAACAACCCACCCACCCAACCTCACATAAACACAATAACCCTCTAACCTAAAATTACTAAACCCTTTAGTGAGGGTTAATTAAT
Open chromatogram file in a new tab
| Position | A peak | T peak | G peak | C peak | Total | A ratio | T ratio | G ratio | C ratio | Primary base | Quality score | Primary ratio |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 0 | 1 | 0 | 1811 | 1812 | 0.00 | 0.00 | 0.00 | 1.00 | C | 6 | 1.00 |
| 2 | 3218 | 618 | 0 | 1868 | 5704 | 0.56 | 0.11 | 0.00 | 0.33 | A | 8 | 0.56 |
| 3 | 2411 | 1060 | 0 | 938 | 4409 | 0.55 | 0.24 | 0.00 | 0.21 | A | 11 | 0.55 |
| 4 | 0 | 1182 | 0 | 0 | 1182 | 0.00 | 1.00 | 0.00 | 0.00 | T | 11 | 1.00 |
| 5 | 0 | 1866 | 0 | 0 | 1866 | 0.00 | 1.00 | 0.00 | 0.00 | T | 10 | 1.00 |
| 6 | 2705 | 1568 | 0 | 4 | 4277 | 0.63 | 0.37 | 0.00 | 0.00 | A | 3 | 0.63 |
| 7 | 2804 | 0 | 0 | 792 | 3596 | 0.78 | 0.00 | 0.00 | 0.22 | A | 11 | 0.78 |
| 8 | 2438 | 0 | 0 | 0 | 2438 | 1.00 | 0.00 | 0.00 | 0.00 | A | 30 | 1.00 |
| 9 | 2 | 1323 | 0 | 0 | 1325 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 10 | 0 | 1979 | 0 | 2 | 1981 | 0.00 | 1.00 | 0.00 | 0.00 | T | 53 | 1.00 |
| 11 | 0 | 2 | 0 | 1935 | 1937 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 12 | 0 | 0 | 0 | 1586 | 1586 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 13 | 0 | 1 | 0 | 0 | 1 | 0.00 | 1.00 | 0.00 | 0.00 | T | 35 | 1.00 |
| 14 | 1557 | 0 | 0 | 0 | 1557 | 1.00 | 0.00 | 0.00 | 0.00 | A | 20 | 1.00 |
| 15 | 0 | 699 | 0 | 141 | 840 | 0.00 | 0.83 | 0.00 | 0.17 | T | 19 | 0.83 |
| 16 | 1717 | 0 | 0 | 0 | 1717 | 1.00 | 0.00 | 0.00 | 0.00 | A | 25 | 1.00 |
| 17 | 1052 | 0 | 0 | 0 | 1052 | 1.00 | 0.00 | 0.00 | 0.00 | A | 55 | 1.00 |
| 18 | 0 | 0 | 0 | 1632 | 1632 | 0.00 | 0.00 | 0.00 | 1.00 | C | 31 | 1.00 |
| 19 | 0 | 0 | 0 | 1542 | 1542 | 0.00 | 0.00 | 0.00 | 1.00 | C | 61 | 1.00 |
| 20 | 0 | 0 | 0 | 1154 | 1154 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 21 | 0 | 1313 | 0 | 0 | 1313 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 22 | 8 | 0 | 0 | 1580 | 1588 | 0.01 | 0.00 | 0.00 | 0.99 | C | 46 | 0.99 |
| 23 | 0 | 729 | 0 | 0 | 729 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 24 | 1863 | 0 | 0 | 0 | 1863 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 25 | 1582 | 0 | 0 | 1 | 1583 | 1.00 | 0.00 | 0.00 | 0.00 | A | 26 | 1.00 |
| 26 | 0 | 0 | 0 | 962 | 962 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 27 | 0 | 1 | 0 | 1132 | 1133 | 0.00 | 0.00 | 0.00 | 1.00 | C | 57 | 1.00 |
| 28 | 0 | 816 | 0 | 1 | 817 | 0.00 | 1.00 | 0.00 | 0.00 | T | 57 | 1.00 |
| 29 | 1951 | 0 | 0 | 0 | 1951 | 1.00 | 0.00 | 0.00 | 0.00 | A | 25 | 1.00 |
| 30 | 664 | 357 | 0 | 0 | 1021 | 0.65 | 0.35 | 0.00 | 0.00 | A | 12 | 0.65 |
| 31 | 1319 | 0 | 0 | 0 | 1319 | 1.00 | 0.00 | 0.00 | 0.00 | A | 21 | 1.00 |
| 32 | 740 | 0 | 0 | 202 | 942 | 0.79 | 0.00 | 0.00 | 0.21 | A | 13 | 0.79 |
| 33 | 0 | 1168 | 0 | 0 | 1168 | 0.00 | 1.00 | 0.00 | 0.00 | T | 25 | 1.00 |
| 34 | 3 | 1858 | 0 | 0 | 1861 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 35 | 1971 | 2 | 0 | 1 | 1974 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 36 | 0 | 1 | 0 | 1152 | 1153 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 37 | 2 | 843 | 0 | 223 | 1068 | 0.00 | 0.79 | 0.00 | 0.21 | T | 34 | 0.79 |
| 38 | 1491 | 792 | 0 | 0 | 2283 | 0.65 | 0.35 | 0.00 | 0.00 | A | 25 | 0.65 |
| 39 | 1454 | 0 | 0 | 2 | 1456 | 1.00 | 0.00 | 0.00 | 0.00 | A | 36 | 1.00 |
| 40 | 789 | 0 | 0 | 0 | 789 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 41 | 0 | 0 | 0 | 1193 | 1193 | 0.00 | 0.00 | 0.00 | 1.00 | C | 31 | 1.00 |
| 42 | 164 | 0 | 0 | 844 | 1008 | 0.16 | 0.00 | 0.00 | 0.84 | C | 51 | 0.84 |
| 43 | 0 | 0 | 0 | 1707 | 1707 | 0.00 | 0.00 | 0.00 | 1.00 | C | 46 | 1.00 |
| 44 | 0 | 1196 | 0 | 286 | 1482 | 0.00 | 0.81 | 0.00 | 0.19 | T | 32 | 0.81 |
| 45 | 39 | 1623 | 0 | 0 | 1662 | 0.02 | 0.98 | 0.00 | 0.00 | T | 41 | 0.98 |
| 46 | 128 | 1183 | 0 | 0 | 1311 | 0.10 | 0.90 | 0.00 | 0.00 | T | 28 | 0.90 |
| 47 | 1643 | 0 | 0 | 0 | 1643 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 48 | 0 | 140 | 1090 | 0 | 1230 | 0.00 | 0.11 | 0.89 | 0.00 | G | 25 | 0.89 |
| 49 | 161 | 795 | 0 | 0 | 956 | 0.17 | 0.83 | 0.00 | 0.00 | T | 32 | 0.83 |
| 50 | 0 | 2 | 768 | 0 | 770 | 0.00 | 0.00 | 1.00 | 0.00 | G | 36 | 1.00 |
| 51 | 1174 | 0 | 0 | 267 | 1441 | 0.81 | 0.00 | 0.00 | 0.19 | A | 25 | 0.81 |
| 52 | 2 | 0 | 1014 | 428 | 1444 | 0.00 | 0.00 | 0.70 | 0.30 | G | 26 | 0.70 |
| 53 | 0 | 0 | 1397 | 388 | 1785 | 0.00 | 0.00 | 0.78 | 0.22 | G | 36 | 0.78 |
| 54 | 0 | 6 | 890 | 297 | 1193 | 0.00 | 0.01 | 0.75 | 0.25 | G | 28 | 0.75 |
| 55 | 0 | 1169 | 1 | 0 | 1170 | 0.00 | 1.00 | 0.00 | 0.00 | T | 46 | 1.00 |
| 56 | 0 | 1168 | 0 | 0 | 1168 | 0.00 | 1.00 | 0.00 | 0.00 | T | 36 | 1.00 |
| 57 | 1213 | 4 | 0 | 0 | 1217 | 1.00 | 0.00 | 0.00 | 0.00 | A | 35 | 1.00 |
| 58 | 1054 | 0 | 0 | 0 | 1054 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 59 | 142 | 1551 | 0 | 0 | 1693 | 0.08 | 0.92 | 0.00 | 0.00 | T | 22 | 0.92 |
| 60 | 0 | 4242 | 0 | 414 | 4656 | 0.00 | 0.91 | 0.00 | 0.09 | T | 30 | 0.91 |
| 61 | 4850 | 10 | 0 | 0 | 4860 | 1.00 | 0.00 | 0.00 | 0.00 | A | 30 | 1.00 |
| 62 | 0 | 0 | 0 | 424 | 424 | 0.00 | 0.00 | 0.00 | 1.00 | C | 14 | 1.00 |
| 63 | 404 | 0 | 0 | 294 | 698 | 0.58 | 0.00 | 0.00 | 0.42 | A | 5 | 0.58 |
| 64 | 197 | 0 | 0 | 0 | 197 | 1.00 | 0.00 | 0.00 | 0.00 | A | 10 | 1.00 |
| 65 | 0 | 0 | 0 | 552 | 552 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 66 | 0 | 0 | 0 | 791 | 791 | 0.00 | 0.00 | 0.00 | 1.00 | C | 57 | 1.00 |
| 67 | 0 | 0 | 0 | 789 | 789 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 68 | 0 | 0 | 0 | 821 | 821 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 69 | 0 | 0 | 0 | 771 | 771 | 0.00 | 0.00 | 0.00 | 1.00 | C | 61 | 1.00 |
| 70 | 1 | 0 | 0 | 658 | 659 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 71 | 329 | 0 | 0 | 0 | 329 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 72 | 6 | 398 | 0 | 3 | 407 | 0.01 | 0.98 | 0.00 | 0.01 | T | 58 | 0.98 |
| 73 | 621 | 0 | 0 | 0 | 621 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 74 | 0 | 0 | 0 | 713 | 713 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 75 | 0 | 0 | 0 | 737 | 737 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 76 | 346 | 0 | 0 | 0 | 346 | 1.00 | 0.00 | 0.00 | 0.00 | A | 46 | 1.00 |
| 77 | 0 | 31 | 0 | 306 | 337 | 0.00 | 0.09 | 0.00 | 0.91 | C | 46 | 0.91 |
| 78 | 2 | 473 | 0 | 0 | 475 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 79 | 676 | 323 | 0 | 0 | 999 | 0.68 | 0.32 | 0.00 | 0.00 | A | 34 | 0.68 |
| 80 | 535 | 14 | 0 | 0 | 549 | 0.97 | 0.03 | 0.00 | 0.00 | A | 34 | 0.97 |
| 81 | 0 | 506 | 0 | 0 | 506 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 82 | 2 | 732 | 0 | 0 | 734 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 83 | 636 | 367 | 0 | 0 | 1003 | 0.63 | 0.37 | 0.00 | 0.00 | A | 25 | 0.63 |
| 84 | 546 | 0 | 0 | 1 | 547 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 85 | 0 | 0 | 0 | 378 | 378 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 86 | 2 | 447 | 0 | 3 | 452 | 0.00 | 0.99 | 0.00 | 0.01 | T | 51 | 0.99 |
| 87 | 635 | 259 | 0 | 0 | 894 | 0.71 | 0.29 | 0.00 | 0.00 | A | 32 | 0.71 |
| 88 | 627 | 0 | 0 | 0 | 627 | 1.00 | 0.00 | 0.00 | 0.00 | A | 46 | 1.00 |
| 89 | 322 | 1 | 0 | 0 | 323 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 90 | 383 | 0 | 0 | 0 | 383 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 91 | 607 | 0 | 0 | 0 | 607 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 92 | 0 | 526 | 0 | 0 | 526 | 0.00 | 1.00 | 0.00 | 0.00 | T | 46 | 1.00 |
| 93 | 0 | 767 | 0 | 3 | 770 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 94 | 0 | 245 | 0 | 568 | 813 | 0.00 | 0.30 | 0.00 | 0.70 | C | 32 | 0.70 |
| 95 | 330 | 0 | 0 | 62 | 392 | 0.84 | 0.00 | 0.00 | 0.16 | A | 25 | 0.84 |
| 96 | 0 | 0 | 0 | 510 | 510 | 0.00 | 0.00 | 0.00 | 1.00 | C | 36 | 1.00 |
| 97 | 0 | 162 | 0 | 636 | 798 | 0.00 | 0.20 | 0.00 | 0.80 | C | 32 | 0.80 |
| 98 | 0 | 471 | 0 | 106 | 577 | 0.00 | 0.82 | 0.00 | 0.18 | T | 32 | 0.82 |
| 99 | 699 | 258 | 0 | 2 | 959 | 0.73 | 0.27 | 0.00 | 0.00 | A | 34 | 0.73 |
| 100 | 142 | 0 | 0 | 500 | 642 | 0.22 | 0.00 | 0.00 | 0.78 | C | 34 | 0.78 |
| 101 | 2 | 0 | 0 | 572 | 574 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 102 | 465 | 0 | 0 | 2 | 467 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 103 | 258 | 0 | 2 | 2 | 262 | 0.98 | 0.00 | 0.01 | 0.01 | A | 58 | 0.98 |
| 104 | 4 | 0 | 0 | 304 | 308 | 0.01 | 0.00 | 0.00 | 0.99 | C | 58 | 0.99 |
| 105 | 0 | 0 | 0 | 641 | 641 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 106 | 252 | 0 | 0 | 144 | 396 | 0.64 | 0.00 | 0.00 | 0.36 | A | 25 | 0.64 |
| 107 | 36 | 0 | 0 | 468 | 504 | 0.07 | 0.00 | 0.00 | 0.93 | C | 34 | 0.93 |
| 108 | 288 | 0 | 0 | 69 | 357 | 0.81 | 0.00 | 0.00 | 0.19 | A | 34 | 0.81 |
| 109 | 562 | 0 | 0 | 0 | 562 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 110 | 19 | 0 | 0 | 255 | 274 | 0.07 | 0.00 | 0.00 | 0.93 | C | 58 | 0.93 |
| 111 | 2 | 0 | 0 | 346 | 348 | 0.01 | 0.00 | 0.00 | 0.99 | C | 58 | 0.99 |
| 112 | 470 | 121 | 0 | 0 | 591 | 0.80 | 0.20 | 0.00 | 0.00 | A | 34 | 0.80 |
| 113 | 588 | 4 | 0 | 0 | 592 | 0.99 | 0.01 | 0.00 | 0.00 | A | 34 | 0.99 |
| 114 | 14 | 394 | 0 | 0 | 408 | 0.03 | 0.97 | 0.00 | 0.00 | T | 51 | 0.97 |
| 115 | 0 | 116 | 0 | 631 | 747 | 0.00 | 0.16 | 0.00 | 0.84 | C | 32 | 0.84 |
| 116 | 469 | 0 | 0 | 153 | 622 | 0.75 | 0.00 | 0.00 | 0.25 | A | 34 | 0.75 |
| 117 | 518 | 0 | 0 | 0 | 518 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 118 | 52 | 0 | 0 | 349 | 401 | 0.13 | 0.00 | 0.00 | 0.87 | C | 58 | 0.87 |
| 119 | 513 | 0 | 0 | 1 | 514 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 120 | 551 | 0 | 0 | 0 | 551 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 121 | 38 | 0 | 0 | 467 | 505 | 0.08 | 0.00 | 0.00 | 0.92 | C | 51 | 0.92 |
| 122 | 422 | 0 | 0 | 177 | 599 | 0.70 | 0.00 | 0.00 | 0.30 | A | 34 | 0.70 |
| 123 | 13 | 0 | 0 | 304 | 317 | 0.04 | 0.00 | 0.00 | 0.96 | C | 58 | 0.96 |
| 124 | 360 | 0 | 0 | 6 | 366 | 0.98 | 0.00 | 0.00 | 0.02 | A | 51 | 0.98 |
| 125 | 280 | 0 | 0 | 0 | 280 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 126 | 531 | 0 | 0 | 0 | 531 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 127 | 2 | 0 | 0 | 656 | 658 | 0.00 | 0.00 | 0.00 | 1.00 | C | 61 | 1.00 |
| 128 | 0 | 0 | 0 | 738 | 738 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 129 | 0 | 0 | 0 | 900 | 900 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 130 | 0 | 169 | 0 | 793 | 962 | 0.00 | 0.18 | 0.00 | 0.82 | C | 34 | 0.82 |
| 131 | 0 | 586 | 0 | 176 | 762 | 0.00 | 0.77 | 0.00 | 0.23 | T | 34 | 0.77 |
| 132 | 0 | 231 | 0 | 882 | 1113 | 0.00 | 0.21 | 0.00 | 0.79 | C | 34 | 0.79 |
| 133 | 0 | 0 | 0 | 839 | 839 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 134 | 0 | 0 | 0 | 737 | 737 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 135 | 2 | 0 | 0 | 420 | 422 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 136 | 467 | 0 | 0 | 119 | 586 | 0.80 | 0.00 | 0.00 | 0.20 | A | 34 | 0.80 |
| 137 | 418 | 0 | 0 | 0 | 418 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 138 | 677 | 0 | 0 | 0 | 677 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 139 | 648 | 0 | 0 | 2 | 650 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 140 | 70 | 0 | 0 | 354 | 424 | 0.17 | 0.00 | 0.00 | 0.83 | C | 58 | 0.83 |
| 141 | 493 | 0 | 0 | 2 | 495 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 142 | 301 | 0 | 0 | 0 | 301 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 143 | 737 | 0 | 0 | 0 | 737 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 144 | 649 | 0 | 0 | 0 | 649 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 145 | 20 | 175 | 0 | 406 | 601 | 0.03 | 0.29 | 0.00 | 0.68 | C | 34 | 0.68 |
| 146 | 3 | 491 | 0 | 2 | 496 | 0.01 | 0.99 | 0.00 | 0.00 | T | 58 | 0.99 |
| 147 | 757 | 52 | 0 | 0 | 809 | 0.94 | 0.06 | 0.00 | 0.00 | A | 58 | 0.94 |
| 148 | 642 | 0 | 0 | 2 | 644 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 149 | 198 | 0 | 0 | 397 | 595 | 0.33 | 0.00 | 0.00 | 0.67 | C | 32 | 0.67 |
| 150 | 434 | 2 | 0 | 2 | 438 | 0.99 | 0.00 | 0.00 | 0.00 | A | 51 | 0.99 |
| 151 | 464 | 0 | 14 | 3 | 481 | 0.96 | 0.00 | 0.03 | 0.01 | A | 58 | 0.96 |
| 152 | 1 | 0 | 0 | 631 | 632 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 153 | 0 | 0 | 0 | 792 | 792 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 154 | 0 | 0 | 0 | 772 | 772 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 155 | 421 | 0 | 0 | 248 | 669 | 0.63 | 0.00 | 0.00 | 0.37 | A | 25 | 0.63 |
| 156 | 2 | 0 | 0 | 642 | 644 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 157 | 0 | 0 | 0 | 837 | 837 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 158 | 2 | 0 | 0 | 448 | 450 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 159 | 463 | 0 | 0 | 88 | 551 | 0.84 | 0.00 | 0.00 | 0.16 | A | 51 | 0.84 |
| 160 | 2 | 0 | 0 | 697 | 699 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 161 | 0 | 0 | 0 | 763 | 763 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 162 | 0 | 0 | 0 | 688 | 688 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 163 | 463 | 0 | 0 | 187 | 650 | 0.71 | 0.00 | 0.00 | 0.29 | A | 34 | 0.71 |
| 164 | 473 | 0 | 0 | 6 | 479 | 0.99 | 0.00 | 0.00 | 0.01 | A | 58 | 0.99 |
| 165 | 0 | 0 | 0 | 489 | 489 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 166 | 0 | 3 | 0 | 744 | 747 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 167 | 0 | 478 | 0 | 162 | 640 | 0.00 | 0.75 | 0.00 | 0.25 | T | 34 | 0.75 |
| 168 | 2 | 16 | 0 | 744 | 762 | 0.00 | 0.02 | 0.00 | 0.98 | C | 31 | 0.98 |
| 169 | 381 | 0 | 0 | 223 | 604 | 0.63 | 0.00 | 0.00 | 0.37 | A | 25 | 0.63 |
| 170 | 28 | 0 | 0 | 455 | 483 | 0.06 | 0.00 | 0.00 | 0.94 | C | 34 | 0.94 |
| 171 | 457 | 144 | 0 | 0 | 601 | 0.76 | 0.24 | 0.00 | 0.00 | A | 34 | 0.76 |
| 172 | 37 | 470 | 0 | 0 | 507 | 0.07 | 0.93 | 0.00 | 0.00 | T | 58 | 0.93 |
| 173 | 678 | 169 | 0 | 0 | 847 | 0.80 | 0.20 | 0.00 | 0.00 | A | 34 | 0.80 |
| 174 | 621 | 0 | 0 | 0 | 621 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 175 | 281 | 0 | 0 | 0 | 281 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 176 | 53 | 0 | 0 | 503 | 556 | 0.10 | 0.00 | 0.00 | 0.90 | C | 51 | 0.90 |
| 177 | 384 | 0 | 0 | 175 | 559 | 0.69 | 0.00 | 0.00 | 0.31 | A | 34 | 0.69 |
| 178 | 17 | 0 | 0 | 505 | 522 | 0.03 | 0.00 | 0.00 | 0.97 | C | 58 | 0.97 |
| 179 | 417 | 0 | 0 | 0 | 417 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 180 | 530 | 0 | 0 | 0 | 530 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 181 | 54 | 392 | 0 | 0 | 446 | 0.12 | 0.88 | 0.00 | 0.00 | T | 58 | 0.88 |
| 182 | 797 | 227 | 0 | 0 | 1024 | 0.78 | 0.22 | 0.00 | 0.00 | A | 34 | 0.78 |
| 183 | 532 | 0 | 0 | 113 | 645 | 0.82 | 0.00 | 0.00 | 0.18 | A | 34 | 0.82 |
| 184 | 5 | 0 | 0 | 654 | 659 | 0.01 | 0.00 | 0.00 | 0.99 | C | 58 | 0.99 |
| 185 | 0 | 0 | 0 | 818 | 818 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 186 | 0 | 6 | 0 | 714 | 720 | 0.00 | 0.01 | 0.00 | 0.99 | C | 34 | 0.99 |
| 187 | 0 | 535 | 0 | 101 | 636 | 0.00 | 0.84 | 0.00 | 0.16 | T | 34 | 0.84 |
| 188 | 0 | 246 | 0 | 710 | 956 | 0.00 | 0.26 | 0.00 | 0.74 | C | 34 | 0.74 |
| 189 | 0 | 391 | 0 | 91 | 482 | 0.00 | 0.81 | 0.00 | 0.19 | T | 34 | 0.81 |
| 190 | 741 | 18 | 0 | 0 | 759 | 0.98 | 0.02 | 0.00 | 0.00 | A | 58 | 0.98 |
| 191 | 609 | 0 | 0 | 0 | 609 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 192 | 7 | 0 | 0 | 555 | 562 | 0.01 | 0.00 | 0.00 | 0.99 | C | 58 | 0.99 |
| 193 | 0 | 7 | 0 | 670 | 677 | 0.00 | 0.01 | 0.00 | 0.99 | C | 34 | 0.99 |
| 194 | 9 | 365 | 0 | 14 | 388 | 0.02 | 0.94 | 0.00 | 0.04 | T | 58 | 0.94 |
| 195 | 717 | 1 | 0 | 0 | 718 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 196 | 609 | 0 | 0 | 0 | 609 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 197 | 593 | 0 | 0 | 0 | 593 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 198 | 601 | 180 | 0 | 0 | 781 | 0.77 | 0.23 | 0.00 | 0.00 | A | 34 | 0.77 |
| 199 | 9 | 545 | 0 | 0 | 554 | 0.02 | 0.98 | 0.00 | 0.00 | T | 58 | 0.98 |
| 200 | 7 | 745 | 0 | 0 | 752 | 0.01 | 0.99 | 0.00 | 0.00 | T | 58 | 0.99 |
| 201 | 688 | 301 | 0 | 0 | 989 | 0.70 | 0.30 | 0.00 | 0.00 | A | 34 | 0.70 |
| 202 | 40 | 6 | 0 | 520 | 566 | 0.07 | 0.01 | 0.00 | 0.92 | C | 34 | 0.92 |
| 203 | 26 | 353 | 0 | 15 | 394 | 0.07 | 0.90 | 0.00 | 0.04 | T | 58 | 0.90 |
| 204 | 746 | 0 | 0 | 0 | 746 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 205 | 605 | 0 | 0 | 0 | 605 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 206 | 495 | 0 | 0 | 125 | 620 | 0.80 | 0.00 | 0.00 | 0.20 | A | 34 | 0.80 |
| 207 | 0 | 0 | 0 | 596 | 596 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 208 | 0 | 0 | 0 | 771 | 771 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 209 | 0 | 161 | 0 | 710 | 871 | 0.00 | 0.18 | 0.00 | 0.82 | C | 34 | 0.82 |
| 210 | 0 | 599 | 0 | 10 | 609 | 0.00 | 0.98 | 0.00 | 0.02 | T | 58 | 0.98 |
| 211 | 0 | 852 | 0 | 0 | 852 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 212 | 16 | 649 | 0 | 0 | 665 | 0.02 | 0.98 | 0.00 | 0.00 | T | 50 | 0.98 |
| 213 | 626 | 284 | 0 | 0 | 910 | 0.69 | 0.31 | 0.00 | 0.00 | A | 33 | 0.69 |
| 214 | 302 | 30 | 504 | 0 | 836 | 0.36 | 0.04 | 0.60 | 0.00 | G | 19 | 0.60 |
| 215 | 0 | 341 | 162 | 12 | 515 | 0.00 | 0.66 | 0.31 | 0.02 | T | 26 | 0.66 |
| 216 | 15 | 2 | 314 | 0 | 331 | 0.05 | 0.01 | 0.95 | 0.00 | G | 45 | 0.95 |
| 217 | 501 | 0 | 366 | 0 | 867 | 0.58 | 0.00 | 0.42 | 0.00 | A | 19 | 0.58 |
| 218 | 21 | 0 | 562 | 0 | 583 | 0.04 | 0.00 | 0.96 | 0.00 | G | 26 | 0.96 |
| 219 | 0 | 0 | 695 | 0 | 695 | 0.00 | 0.00 | 1.00 | 0.00 | G | 30 | 1.00 |
| 220 | 0 | 111 | 526 | 0 | 637 | 0.00 | 0.17 | 0.83 | 0.00 | G | 30 | 0.83 |
| 221 | 0 | 561 | 116 | 0 | 677 | 0.00 | 0.83 | 0.17 | 0.00 | T | 30 | 0.83 |
| 222 | 115 | 613 | 0 | 0 | 728 | 0.16 | 0.84 | 0.00 | 0.00 | T | 30 | 0.84 |
| 223 | 443 | 0 | 0 | 0 | 443 | 1.00 | 0.00 | 0.00 | 0.00 | A | 30 | 1.00 |
| 224 | 424 | 0 | 0 | 0 | 424 | 1.00 | 0.00 | 0.00 | 0.00 | A | 33 | 1.00 |
| 225 | 0 | 857 | 0 | 0 | 857 | 0.00 | 1.00 | 0.00 | 0.00 | T | 35 | 1.00 |
| 226 | 256 | 1854 | 0 | 0 | 2110 | 0.12 | 0.88 | 0.00 | 0.00 | T | 35 | 0.88 |
| 227 | 1927 | 281 | 0 | 0 | 2208 | 0.87 | 0.13 | 0.00 | 0.00 | A | 22 | 0.87 |
| 228 | 555 | 25 | 0 | 0 | 580 | 0.96 | 0.04 | 0.00 | 0.00 | A | 17 | 0.96 |
| 229 | 0 | 22 | 0 | 0 | 22 | 0.00 | 1.00 | 0.00 | 0.00 | T | 15 | 1.00 |
Trimming thresholds :
| Raw sequence information | Values |
|---|---|
| Raw sequence length : | 229 bp |
| Mean of raw sequence Phred quality scores : | 42.87 |
| Quality report - Trimmed sequence information | Values |
|---|---|
| Trimmed sequence length : | 204 bp |
| Trimmed sequence start position : | 9 |
| Trimmed sequence end position : | 213 |
| Mean of trimmed sequence Phred quality scores : | 45.26 |
Trimming thresholds :
| Raw sequence information | Values |
|---|---|
| Raw sequence length : | 229 bp |
| Mean of raw sequence primary peak ratios : | 0.92 |
| Percentage of non-mixed positions on raw sequence : | 88.65 % |
| Mixed peak report - Trimmed sequence information | Values |
|---|---|
| Trimmed sequence length : | 223 bp |
| Trimmed sequence start position : | 7 |
| Trimmed sequence end position : | 229 |
| Mean of trimmed sequence primary peak ratios : | 0.92 |
| Percentage of non-mixed positions on trimmed sequence : | 89.69 % |
| Final trimmed sequence information | Values |
|---|---|
| Length : | 205 bp |
| Start position : | 9 |
| End position : | 213 |
| Mean of Phred quality scores : | 45.29 |
| Mean of primary peak ratio : | 0.93 |
| Percentage of non-mixed positions : | 90.24 % |
Sequence of primary peaks:
## TTCCTATAACCCTCTAACCTAAAATTACTAAACCCTTTAGTGAGGGTTAATTACAACCCCCCATACCACTAATTAACTAAAAATTCACCTACCAACCACAACCAATCAACAACACAAACCCCTCCCCAAAACAAAACTAACAACCCACCCACCCAACCTCACATAAACACAATAACCCTCTAACCTAAAATTACTAAACCCTTTA
Open chromatogram file in a new tab
| Position | A peak | T peak | G peak | C peak | Total | A ratio | T ratio | G ratio | C ratio | Primary base | Quality score | Primary ratio |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9 | 2 | 1323 | 0 | 0 | 1325 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 10 | 0 | 1979 | 0 | 2 | 1981 | 0.00 | 1.00 | 0.00 | 0.00 | T | 53 | 1.00 |
| 11 | 0 | 2 | 0 | 1935 | 1937 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 12 | 0 | 0 | 0 | 1586 | 1586 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 13 | 0 | 1 | 0 | 0 | 1 | 0.00 | 1.00 | 0.00 | 0.00 | T | 35 | 1.00 |
| 14 | 1557 | 0 | 0 | 0 | 1557 | 1.00 | 0.00 | 0.00 | 0.00 | A | 20 | 1.00 |
| 15 | 0 | 699 | 0 | 141 | 840 | 0.00 | 0.83 | 0.00 | 0.17 | T | 19 | 0.83 |
| 16 | 1717 | 0 | 0 | 0 | 1717 | 1.00 | 0.00 | 0.00 | 0.00 | A | 25 | 1.00 |
| 17 | 1052 | 0 | 0 | 0 | 1052 | 1.00 | 0.00 | 0.00 | 0.00 | A | 55 | 1.00 |
| 18 | 0 | 0 | 0 | 1632 | 1632 | 0.00 | 0.00 | 0.00 | 1.00 | C | 31 | 1.00 |
| 19 | 0 | 0 | 0 | 1542 | 1542 | 0.00 | 0.00 | 0.00 | 1.00 | C | 61 | 1.00 |
| 20 | 0 | 0 | 0 | 1154 | 1154 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 21 | 0 | 1313 | 0 | 0 | 1313 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 22 | 8 | 0 | 0 | 1580 | 1588 | 0.01 | 0.00 | 0.00 | 0.99 | C | 46 | 0.99 |
| 23 | 0 | 729 | 0 | 0 | 729 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 24 | 1863 | 0 | 0 | 0 | 1863 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 25 | 1582 | 0 | 0 | 1 | 1583 | 1.00 | 0.00 | 0.00 | 0.00 | A | 26 | 1.00 |
| 26 | 0 | 0 | 0 | 962 | 962 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 27 | 0 | 1 | 0 | 1132 | 1133 | 0.00 | 0.00 | 0.00 | 1.00 | C | 57 | 1.00 |
| 28 | 0 | 816 | 0 | 1 | 817 | 0.00 | 1.00 | 0.00 | 0.00 | T | 57 | 1.00 |
| 29 | 1951 | 0 | 0 | 0 | 1951 | 1.00 | 0.00 | 0.00 | 0.00 | A | 25 | 1.00 |
| 30 | 664 | 357 | 0 | 0 | 1021 | 0.65 | 0.35 | 0.00 | 0.00 | A | 12 | 0.65 |
| 31 | 1319 | 0 | 0 | 0 | 1319 | 1.00 | 0.00 | 0.00 | 0.00 | A | 21 | 1.00 |
| 32 | 740 | 0 | 0 | 202 | 942 | 0.79 | 0.00 | 0.00 | 0.21 | A | 13 | 0.79 |
| 33 | 0 | 1168 | 0 | 0 | 1168 | 0.00 | 1.00 | 0.00 | 0.00 | T | 25 | 1.00 |
| 34 | 3 | 1858 | 0 | 0 | 1861 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 35 | 1971 | 2 | 0 | 1 | 1974 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 36 | 0 | 1 | 0 | 1152 | 1153 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 37 | 2 | 843 | 0 | 223 | 1068 | 0.00 | 0.79 | 0.00 | 0.21 | T | 34 | 0.79 |
| 38 | 1491 | 792 | 0 | 0 | 2283 | 0.65 | 0.35 | 0.00 | 0.00 | A | 25 | 0.65 |
| 39 | 1454 | 0 | 0 | 2 | 1456 | 1.00 | 0.00 | 0.00 | 0.00 | A | 36 | 1.00 |
| 40 | 789 | 0 | 0 | 0 | 789 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 41 | 0 | 0 | 0 | 1193 | 1193 | 0.00 | 0.00 | 0.00 | 1.00 | C | 31 | 1.00 |
| 42 | 164 | 0 | 0 | 844 | 1008 | 0.16 | 0.00 | 0.00 | 0.84 | C | 51 | 0.84 |
| 43 | 0 | 0 | 0 | 1707 | 1707 | 0.00 | 0.00 | 0.00 | 1.00 | C | 46 | 1.00 |
| 44 | 0 | 1196 | 0 | 286 | 1482 | 0.00 | 0.81 | 0.00 | 0.19 | T | 32 | 0.81 |
| 45 | 39 | 1623 | 0 | 0 | 1662 | 0.02 | 0.98 | 0.00 | 0.00 | T | 41 | 0.98 |
| 46 | 128 | 1183 | 0 | 0 | 1311 | 0.10 | 0.90 | 0.00 | 0.00 | T | 28 | 0.90 |
| 47 | 1643 | 0 | 0 | 0 | 1643 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 48 | 0 | 140 | 1090 | 0 | 1230 | 0.00 | 0.11 | 0.89 | 0.00 | G | 25 | 0.89 |
| 49 | 161 | 795 | 0 | 0 | 956 | 0.17 | 0.83 | 0.00 | 0.00 | T | 32 | 0.83 |
| 50 | 0 | 2 | 768 | 0 | 770 | 0.00 | 0.00 | 1.00 | 0.00 | G | 36 | 1.00 |
| 51 | 1174 | 0 | 0 | 267 | 1441 | 0.81 | 0.00 | 0.00 | 0.19 | A | 25 | 0.81 |
| 52 | 2 | 0 | 1014 | 428 | 1444 | 0.00 | 0.00 | 0.70 | 0.30 | G | 26 | 0.70 |
| 53 | 0 | 0 | 1397 | 388 | 1785 | 0.00 | 0.00 | 0.78 | 0.22 | G | 36 | 0.78 |
| 54 | 0 | 6 | 890 | 297 | 1193 | 0.00 | 0.01 | 0.75 | 0.25 | G | 28 | 0.75 |
| 55 | 0 | 1169 | 1 | 0 | 1170 | 0.00 | 1.00 | 0.00 | 0.00 | T | 46 | 1.00 |
| 56 | 0 | 1168 | 0 | 0 | 1168 | 0.00 | 1.00 | 0.00 | 0.00 | T | 36 | 1.00 |
| 57 | 1213 | 4 | 0 | 0 | 1217 | 1.00 | 0.00 | 0.00 | 0.00 | A | 35 | 1.00 |
| 58 | 1054 | 0 | 0 | 0 | 1054 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 59 | 142 | 1551 | 0 | 0 | 1693 | 0.08 | 0.92 | 0.00 | 0.00 | T | 22 | 0.92 |
| 60 | 0 | 4242 | 0 | 414 | 4656 | 0.00 | 0.91 | 0.00 | 0.09 | T | 30 | 0.91 |
| 61 | 4850 | 10 | 0 | 0 | 4860 | 1.00 | 0.00 | 0.00 | 0.00 | A | 30 | 1.00 |
| 62 | 0 | 0 | 0 | 424 | 424 | 0.00 | 0.00 | 0.00 | 1.00 | C | 14 | 1.00 |
| 63 | 404 | 0 | 0 | 294 | 698 | 0.58 | 0.00 | 0.00 | 0.42 | A | 5 | 0.58 |
| 64 | 197 | 0 | 0 | 0 | 197 | 1.00 | 0.00 | 0.00 | 0.00 | A | 10 | 1.00 |
| 65 | 0 | 0 | 0 | 552 | 552 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 66 | 0 | 0 | 0 | 791 | 791 | 0.00 | 0.00 | 0.00 | 1.00 | C | 57 | 1.00 |
| 67 | 0 | 0 | 0 | 789 | 789 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 68 | 0 | 0 | 0 | 821 | 821 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 69 | 0 | 0 | 0 | 771 | 771 | 0.00 | 0.00 | 0.00 | 1.00 | C | 61 | 1.00 |
| 70 | 1 | 0 | 0 | 658 | 659 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 71 | 329 | 0 | 0 | 0 | 329 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 72 | 6 | 398 | 0 | 3 | 407 | 0.01 | 0.98 | 0.00 | 0.01 | T | 58 | 0.98 |
| 73 | 621 | 0 | 0 | 0 | 621 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 74 | 0 | 0 | 0 | 713 | 713 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 75 | 0 | 0 | 0 | 737 | 737 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 76 | 346 | 0 | 0 | 0 | 346 | 1.00 | 0.00 | 0.00 | 0.00 | A | 46 | 1.00 |
| 77 | 0 | 31 | 0 | 306 | 337 | 0.00 | 0.09 | 0.00 | 0.91 | C | 46 | 0.91 |
| 78 | 2 | 473 | 0 | 0 | 475 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 79 | 676 | 323 | 0 | 0 | 999 | 0.68 | 0.32 | 0.00 | 0.00 | A | 34 | 0.68 |
| 80 | 535 | 14 | 0 | 0 | 549 | 0.97 | 0.03 | 0.00 | 0.00 | A | 34 | 0.97 |
| 81 | 0 | 506 | 0 | 0 | 506 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 82 | 2 | 732 | 0 | 0 | 734 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 83 | 636 | 367 | 0 | 0 | 1003 | 0.63 | 0.37 | 0.00 | 0.00 | A | 25 | 0.63 |
| 84 | 546 | 0 | 0 | 1 | 547 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 85 | 0 | 0 | 0 | 378 | 378 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 86 | 2 | 447 | 0 | 3 | 452 | 0.00 | 0.99 | 0.00 | 0.01 | T | 51 | 0.99 |
| 87 | 635 | 259 | 0 | 0 | 894 | 0.71 | 0.29 | 0.00 | 0.00 | A | 32 | 0.71 |
| 88 | 627 | 0 | 0 | 0 | 627 | 1.00 | 0.00 | 0.00 | 0.00 | A | 46 | 1.00 |
| 89 | 322 | 1 | 0 | 0 | 323 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 90 | 383 | 0 | 0 | 0 | 383 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 91 | 607 | 0 | 0 | 0 | 607 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 92 | 0 | 526 | 0 | 0 | 526 | 0.00 | 1.00 | 0.00 | 0.00 | T | 46 | 1.00 |
| 93 | 0 | 767 | 0 | 3 | 770 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 94 | 0 | 245 | 0 | 568 | 813 | 0.00 | 0.30 | 0.00 | 0.70 | C | 32 | 0.70 |
| 95 | 330 | 0 | 0 | 62 | 392 | 0.84 | 0.00 | 0.00 | 0.16 | A | 25 | 0.84 |
| 96 | 0 | 0 | 0 | 510 | 510 | 0.00 | 0.00 | 0.00 | 1.00 | C | 36 | 1.00 |
| 97 | 0 | 162 | 0 | 636 | 798 | 0.00 | 0.20 | 0.00 | 0.80 | C | 32 | 0.80 |
| 98 | 0 | 471 | 0 | 106 | 577 | 0.00 | 0.82 | 0.00 | 0.18 | T | 32 | 0.82 |
| 99 | 699 | 258 | 0 | 2 | 959 | 0.73 | 0.27 | 0.00 | 0.00 | A | 34 | 0.73 |
| 100 | 142 | 0 | 0 | 500 | 642 | 0.22 | 0.00 | 0.00 | 0.78 | C | 34 | 0.78 |
| 101 | 2 | 0 | 0 | 572 | 574 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 102 | 465 | 0 | 0 | 2 | 467 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 103 | 258 | 0 | 2 | 2 | 262 | 0.98 | 0.00 | 0.01 | 0.01 | A | 58 | 0.98 |
| 104 | 4 | 0 | 0 | 304 | 308 | 0.01 | 0.00 | 0.00 | 0.99 | C | 58 | 0.99 |
| 105 | 0 | 0 | 0 | 641 | 641 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 106 | 252 | 0 | 0 | 144 | 396 | 0.64 | 0.00 | 0.00 | 0.36 | A | 25 | 0.64 |
| 107 | 36 | 0 | 0 | 468 | 504 | 0.07 | 0.00 | 0.00 | 0.93 | C | 34 | 0.93 |
| 108 | 288 | 0 | 0 | 69 | 357 | 0.81 | 0.00 | 0.00 | 0.19 | A | 34 | 0.81 |
| 109 | 562 | 0 | 0 | 0 | 562 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 110 | 19 | 0 | 0 | 255 | 274 | 0.07 | 0.00 | 0.00 | 0.93 | C | 58 | 0.93 |
| 111 | 2 | 0 | 0 | 346 | 348 | 0.01 | 0.00 | 0.00 | 0.99 | C | 58 | 0.99 |
| 112 | 470 | 121 | 0 | 0 | 591 | 0.80 | 0.20 | 0.00 | 0.00 | A | 34 | 0.80 |
| 113 | 588 | 4 | 0 | 0 | 592 | 0.99 | 0.01 | 0.00 | 0.00 | A | 34 | 0.99 |
| 114 | 14 | 394 | 0 | 0 | 408 | 0.03 | 0.97 | 0.00 | 0.00 | T | 51 | 0.97 |
| 115 | 0 | 116 | 0 | 631 | 747 | 0.00 | 0.16 | 0.00 | 0.84 | C | 32 | 0.84 |
| 116 | 469 | 0 | 0 | 153 | 622 | 0.75 | 0.00 | 0.00 | 0.25 | A | 34 | 0.75 |
| 117 | 518 | 0 | 0 | 0 | 518 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 118 | 52 | 0 | 0 | 349 | 401 | 0.13 | 0.00 | 0.00 | 0.87 | C | 58 | 0.87 |
| 119 | 513 | 0 | 0 | 1 | 514 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 120 | 551 | 0 | 0 | 0 | 551 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 121 | 38 | 0 | 0 | 467 | 505 | 0.08 | 0.00 | 0.00 | 0.92 | C | 51 | 0.92 |
| 122 | 422 | 0 | 0 | 177 | 599 | 0.70 | 0.00 | 0.00 | 0.30 | A | 34 | 0.70 |
| 123 | 13 | 0 | 0 | 304 | 317 | 0.04 | 0.00 | 0.00 | 0.96 | C | 58 | 0.96 |
| 124 | 360 | 0 | 0 | 6 | 366 | 0.98 | 0.00 | 0.00 | 0.02 | A | 51 | 0.98 |
| 125 | 280 | 0 | 0 | 0 | 280 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 126 | 531 | 0 | 0 | 0 | 531 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 127 | 2 | 0 | 0 | 656 | 658 | 0.00 | 0.00 | 0.00 | 1.00 | C | 61 | 1.00 |
| 128 | 0 | 0 | 0 | 738 | 738 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 129 | 0 | 0 | 0 | 900 | 900 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 130 | 0 | 169 | 0 | 793 | 962 | 0.00 | 0.18 | 0.00 | 0.82 | C | 34 | 0.82 |
| 131 | 0 | 586 | 0 | 176 | 762 | 0.00 | 0.77 | 0.00 | 0.23 | T | 34 | 0.77 |
| 132 | 0 | 231 | 0 | 882 | 1113 | 0.00 | 0.21 | 0.00 | 0.79 | C | 34 | 0.79 |
| 133 | 0 | 0 | 0 | 839 | 839 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 134 | 0 | 0 | 0 | 737 | 737 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 135 | 2 | 0 | 0 | 420 | 422 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 136 | 467 | 0 | 0 | 119 | 586 | 0.80 | 0.00 | 0.00 | 0.20 | A | 34 | 0.80 |
| 137 | 418 | 0 | 0 | 0 | 418 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 138 | 677 | 0 | 0 | 0 | 677 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 139 | 648 | 0 | 0 | 2 | 650 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 140 | 70 | 0 | 0 | 354 | 424 | 0.17 | 0.00 | 0.00 | 0.83 | C | 58 | 0.83 |
| 141 | 493 | 0 | 0 | 2 | 495 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 142 | 301 | 0 | 0 | 0 | 301 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 143 | 737 | 0 | 0 | 0 | 737 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 144 | 649 | 0 | 0 | 0 | 649 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 145 | 20 | 175 | 0 | 406 | 601 | 0.03 | 0.29 | 0.00 | 0.68 | C | 34 | 0.68 |
| 146 | 3 | 491 | 0 | 2 | 496 | 0.01 | 0.99 | 0.00 | 0.00 | T | 58 | 0.99 |
| 147 | 757 | 52 | 0 | 0 | 809 | 0.94 | 0.06 | 0.00 | 0.00 | A | 58 | 0.94 |
| 148 | 642 | 0 | 0 | 2 | 644 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 149 | 198 | 0 | 0 | 397 | 595 | 0.33 | 0.00 | 0.00 | 0.67 | C | 32 | 0.67 |
| 150 | 434 | 2 | 0 | 2 | 438 | 0.99 | 0.00 | 0.00 | 0.00 | A | 51 | 0.99 |
| 151 | 464 | 0 | 14 | 3 | 481 | 0.96 | 0.00 | 0.03 | 0.01 | A | 58 | 0.96 |
| 152 | 1 | 0 | 0 | 631 | 632 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 153 | 0 | 0 | 0 | 792 | 792 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 154 | 0 | 0 | 0 | 772 | 772 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 155 | 421 | 0 | 0 | 248 | 669 | 0.63 | 0.00 | 0.00 | 0.37 | A | 25 | 0.63 |
| 156 | 2 | 0 | 0 | 642 | 644 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 157 | 0 | 0 | 0 | 837 | 837 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 158 | 2 | 0 | 0 | 448 | 450 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 159 | 463 | 0 | 0 | 88 | 551 | 0.84 | 0.00 | 0.00 | 0.16 | A | 51 | 0.84 |
| 160 | 2 | 0 | 0 | 697 | 699 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 161 | 0 | 0 | 0 | 763 | 763 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 162 | 0 | 0 | 0 | 688 | 688 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 163 | 463 | 0 | 0 | 187 | 650 | 0.71 | 0.00 | 0.00 | 0.29 | A | 34 | 0.71 |
| 164 | 473 | 0 | 0 | 6 | 479 | 0.99 | 0.00 | 0.00 | 0.01 | A | 58 | 0.99 |
| 165 | 0 | 0 | 0 | 489 | 489 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 166 | 0 | 3 | 0 | 744 | 747 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 167 | 0 | 478 | 0 | 162 | 640 | 0.00 | 0.75 | 0.00 | 0.25 | T | 34 | 0.75 |
| 168 | 2 | 16 | 0 | 744 | 762 | 0.00 | 0.02 | 0.00 | 0.98 | C | 31 | 0.98 |
| 169 | 381 | 0 | 0 | 223 | 604 | 0.63 | 0.00 | 0.00 | 0.37 | A | 25 | 0.63 |
| 170 | 28 | 0 | 0 | 455 | 483 | 0.06 | 0.00 | 0.00 | 0.94 | C | 34 | 0.94 |
| 171 | 457 | 144 | 0 | 0 | 601 | 0.76 | 0.24 | 0.00 | 0.00 | A | 34 | 0.76 |
| 172 | 37 | 470 | 0 | 0 | 507 | 0.07 | 0.93 | 0.00 | 0.00 | T | 58 | 0.93 |
| 173 | 678 | 169 | 0 | 0 | 847 | 0.80 | 0.20 | 0.00 | 0.00 | A | 34 | 0.80 |
| 174 | 621 | 0 | 0 | 0 | 621 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 175 | 281 | 0 | 0 | 0 | 281 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 176 | 53 | 0 | 0 | 503 | 556 | 0.10 | 0.00 | 0.00 | 0.90 | C | 51 | 0.90 |
| 177 | 384 | 0 | 0 | 175 | 559 | 0.69 | 0.00 | 0.00 | 0.31 | A | 34 | 0.69 |
| 178 | 17 | 0 | 0 | 505 | 522 | 0.03 | 0.00 | 0.00 | 0.97 | C | 58 | 0.97 |
| 179 | 417 | 0 | 0 | 0 | 417 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 180 | 530 | 0 | 0 | 0 | 530 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 181 | 54 | 392 | 0 | 0 | 446 | 0.12 | 0.88 | 0.00 | 0.00 | T | 58 | 0.88 |
| 182 | 797 | 227 | 0 | 0 | 1024 | 0.78 | 0.22 | 0.00 | 0.00 | A | 34 | 0.78 |
| 183 | 532 | 0 | 0 | 113 | 645 | 0.82 | 0.00 | 0.00 | 0.18 | A | 34 | 0.82 |
| 184 | 5 | 0 | 0 | 654 | 659 | 0.01 | 0.00 | 0.00 | 0.99 | C | 58 | 0.99 |
| 185 | 0 | 0 | 0 | 818 | 818 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 186 | 0 | 6 | 0 | 714 | 720 | 0.00 | 0.01 | 0.00 | 0.99 | C | 34 | 0.99 |
| 187 | 0 | 535 | 0 | 101 | 636 | 0.00 | 0.84 | 0.00 | 0.16 | T | 34 | 0.84 |
| 188 | 0 | 246 | 0 | 710 | 956 | 0.00 | 0.26 | 0.00 | 0.74 | C | 34 | 0.74 |
| 189 | 0 | 391 | 0 | 91 | 482 | 0.00 | 0.81 | 0.00 | 0.19 | T | 34 | 0.81 |
| 190 | 741 | 18 | 0 | 0 | 759 | 0.98 | 0.02 | 0.00 | 0.00 | A | 58 | 0.98 |
| 191 | 609 | 0 | 0 | 0 | 609 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 192 | 7 | 0 | 0 | 555 | 562 | 0.01 | 0.00 | 0.00 | 0.99 | C | 58 | 0.99 |
| 193 | 0 | 7 | 0 | 670 | 677 | 0.00 | 0.01 | 0.00 | 0.99 | C | 34 | 0.99 |
| 194 | 9 | 365 | 0 | 14 | 388 | 0.02 | 0.94 | 0.00 | 0.04 | T | 58 | 0.94 |
| 195 | 717 | 1 | 0 | 0 | 718 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 196 | 609 | 0 | 0 | 0 | 609 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 197 | 593 | 0 | 0 | 0 | 593 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 198 | 601 | 180 | 0 | 0 | 781 | 0.77 | 0.23 | 0.00 | 0.00 | A | 34 | 0.77 |
| 199 | 9 | 545 | 0 | 0 | 554 | 0.02 | 0.98 | 0.00 | 0.00 | T | 58 | 0.98 |
| 200 | 7 | 745 | 0 | 0 | 752 | 0.01 | 0.99 | 0.00 | 0.00 | T | 58 | 0.99 |
| 201 | 688 | 301 | 0 | 0 | 989 | 0.70 | 0.30 | 0.00 | 0.00 | A | 34 | 0.70 |
| 202 | 40 | 6 | 0 | 520 | 566 | 0.07 | 0.01 | 0.00 | 0.92 | C | 34 | 0.92 |
| 203 | 26 | 353 | 0 | 15 | 394 | 0.07 | 0.90 | 0.00 | 0.04 | T | 58 | 0.90 |
| 204 | 746 | 0 | 0 | 0 | 746 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 205 | 605 | 0 | 0 | 0 | 605 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 206 | 495 | 0 | 0 | 125 | 620 | 0.80 | 0.00 | 0.00 | 0.20 | A | 34 | 0.80 |
| 207 | 0 | 0 | 0 | 596 | 596 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 208 | 0 | 0 | 0 | 771 | 771 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 209 | 0 | 161 | 0 | 710 | 871 | 0.00 | 0.18 | 0.00 | 0.82 | C | 34 | 0.82 |
| 210 | 0 | 599 | 0 | 10 | 609 | 0.00 | 0.98 | 0.00 | 0.02 | T | 58 | 0.98 |
| 211 | 0 | 852 | 0 | 0 | 852 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 212 | 16 | 649 | 0 | 0 | 665 | 0.02 | 0.98 | 0.00 | 0.00 | T | 50 | 0.98 |
| 213 | 626 | 284 | 0 | 0 | 910 | 0.69 | 0.31 | 0.00 | 0.00 | A | 33 | 0.69 |
Sequencing result #1 is aligned on both sense and antisense bisulfite converted DNA sequences to determine the sequencing direction as forward or reverse.
Warning: Trimmed sequence from the sequencing result #1 was found with insufficient length or insufficient quality and will not be used.
Trimmed sequence of primary peaks from sequencing result #1 is aligned with bisulfite converted reference DNA sense sequence
Trimmed sequence of primary peaks from sequencing result #1 is aligned with bisulfite converted reference DNA antisense sequence
Warning: Insufficient quality of trimmed sequence for direction determination.
Sequencing result #2 is aligned on both sense and antisense bisulfite converted DNA sequences to determine the sequencing direction as forward or reverse.
Trimmed sequence of primary peaks from sequencing result #2 is aligned with bisulfite converted reference DNA sense sequence
## ########################################
## # Program: Biostrings (version 2.62.0), a Bioconductor package
## # Rundate: Tue May 03 14:33:31 2022
## ########################################
## #=======================================
## #
## # Aligned_sequences: 2
## # 1: P1
## # 2: S1
## # Matrix: NA
## # Gap_penalty: 14.0
## # Extend_penalty: 4.0
## #
## # Length: 8
## # Identity: 8/8 (100.0%)
## # Similarity: NA/8 (NA%)
## # Gaps: 0/8 (0.0%)
## # Score: 15.85405
## #
## #
## #=======================================
##
## P1 42 GAGGGTTA 49
## ||||||||
## S1 87 GAGGGTTA 94
##
##
## #---------------------------------------
## #---------------------------------------
Trimmed sequence of primary peaks from sequencing result #2 is aligned with bisulfite converted reference DNA antisense sequence
## ########################################
## # Program: Biostrings (version 2.62.0), a Bioconductor package
## # Rundate: Tue May 03 14:33:31 2022
## ########################################
## #=======================================
## #
## # Aligned_sequences: 2
## # 1: P1
## # 2: S1
## # Matrix: NA
## # Gap_penalty: 14.0
## # Extend_penalty: 4.0
## #
## # Length: 142
## # Identity: 130/142 (91.5%)
## # Similarity: NA/142 (NA%)
## # Gaps: 0/142 (0.0%)
## # Score: 186.8367
## #
## #
## #=======================================
##
## P1 57 CCCCCCATACCACTAATTAA 76
## |||||| |||| ||||||||
## S1 132 CCCCCCGTACCGCTAATTAA 151
##
## P1 77 CTAAAAATTCACCTACCAAC 96
## ||||||||||||||||| ||
## S1 152 CTAAAAATTCACCTACCGAC 171
##
## P1 97 CACAACCAATCAACAACACA 116
## ||||||||||||||||| |
## S1 172 CACAACCAATCAACAACGCG 191
##
## P1 117 AACCCCTCCCCAAAACAAAA 136
## |||||||||||||||| |||
## S1 192 AACCCCTCCCCAAAACGAAA 211
##
## P1 137 CTAACAACCCACCCACCCAA 156
## ||||| |||| ||||||| |
## S1 212 CTAACGACCCGCCCACCCGA 231
##
## P1 157 CCTCACATAAACACAATAAC 176
## |||| ||||||| | |||||
## S1 232 CCTCGCATAAACGCGATAAC 251
##
## P1 177 CCTCTAACCTAAAATTACTA 196
## ||||||||||||||||||||
## S1 252 CCTCTAACCTAAAATTACTA 271
##
## P1 197 AA 198
## ||
## S1 272 AA 273
##
##
## #---------------------------------------
## #---------------------------------------
Sequencing result #2 corresponds to reverse direction
To find nucleotides of reference DNA sequence positions on sequencing result, the trimmed sequence of primary peaks from forward sequencing results is aligned with bisulfite converted reference DNA sense sequence.
Warning: Insufficient length or quality of trimmed forward sequencing.
Warning: Insufficient length or quality of trimmed forward sequencing.
To find nucleotides of reference DNA sequence positions on sequencing result, the trimmed sequence of primary peaks from reverse sequencing results is aligned with bisulfite converted reference DNA antisense sequence.
## ########################################
## # Program: Biostrings (version 2.62.0), a Bioconductor package
## # Rundate: Tue May 03 14:33:32 2022
## ########################################
## #=======================================
## #
## # Aligned_sequences: 2
## # 1: P1
## # 2: S1
## # Matrix: NA
## # Gap_penalty: 14.0
## # Extend_penalty: 4.0
## #
## # Length: 142
## # Identity: 130/142 (91.5%)
## # Similarity: NA/142 (NA%)
## # Gaps: 0/142 (0.0%)
## # Score: 186.8367
## #
## #
## #=======================================
##
## P1 57 CCCCCCATACCACTAATTAA 76
## |||||| |||| ||||||||
## S1 132 CCCCCCGTACCGCTAATTAA 151
##
## P1 77 CTAAAAATTCACCTACCAAC 96
## ||||||||||||||||| ||
## S1 152 CTAAAAATTCACCTACCGAC 171
##
## P1 97 CACAACCAATCAACAACACA 116
## ||||||||||||||||| |
## S1 172 CACAACCAATCAACAACGCG 191
##
## P1 117 AACCCCTCCCCAAAACAAAA 136
## |||||||||||||||| |||
## S1 192 AACCCCTCCCCAAAACGAAA 211
##
## P1 137 CTAACAACCCACCCACCCAA 156
## ||||| |||| ||||||| |
## S1 212 CTAACGACCCGCCCACCCGA 231
##
## P1 157 CCTCACATAAACACAATAAC 176
## |||| ||||||| | |||||
## S1 232 CCTCGCATAAACGCGATAAC 251
##
## P1 177 CCTCTAACCTAAAATTACTA 196
## ||||||||||||||||||||
## S1 252 CCTCTAACCTAAAATTACTA 271
##
## P1 197 AA 198
## ||
## S1 272 AA 273
##
##
## #---------------------------------------
## #---------------------------------------
Aligned sequence from reverse sequencing result (Pattern P1):
Length: 142 bp
## CCCCCCATACCACTAATTAACTAAAAATTCACCTACCAACCACAACCAATCAACAACACAAACCCCTCCCCAAAACAAAACTAACAACCCACCCACCCAACCTCACATAAACACAATAACCCTCTAACCTAAAATTACTAAA
Aligned sequence from bisulfite converted reference DNA antisense sequence (Subject S1):
Length: 142 bp
## CCCCCCGTACCGCTAATTAACTAAAAATTCACCTACCGACCACAACCAATCAACAACGCGAACCCCTCCCCAAAACGAAACTAACGACCCGCCCACCCGACCTCGCATAAACGCGATAACCCTCTAACCTAAAATTACTAAA
| Thresholds | Values |
|---|---|
| Minimum length of the aligned sequence : | 30 bp |
| Minimum identity percentage of alignment : | 75 % |
| Minimum of bisulfite conversion rate mean : | 0.9 |
| Direction | Sequencing | Length | Identity | Mismatch | Indel in DNA reference | Indel in sequencing | Mean of conversion rates | SD of conversion rates | Quality Result |
|---|---|---|---|---|---|---|---|---|---|
| Reverse | #2 | 142 | 91.55 | 12 | 0 | 0 | 1 | 0.01 | Correct |
Forward sequencing result could have not been trimmed due to poor quality.
| Positions in trimmed sequencing result | Nucleotides in trimmed sequencing result | Positions in reference DNA sequence | Nucleotides in reference DNA sequence |
|---|---|---|---|
| 63 | A | 138 | G |
| 68 | A | 143 | G |
| 94 | A | 169 | G |
| 114 | A | 189 | G |
| 116 | A | 191 | G |
| 133 | A | 208 | G |
| 142 | A | 217 | G |
| 147 | A | 222 | G |
| 155 | A | 230 | G |
| 161 | A | 236 | G |
| 169 | A | 244 | G |
| 171 | A | 246 | G |
No insertions/deletions in reverse alignment.
| C number | Bisulfite conversion rate Reverse |
|---|---|
| 50 | 1.00 |
| 49 | 1.00 |
| 48 | 1.00 |
| 47 | 1.00 |
| 46 | 1.00 |
| 45 | 1.00 |
| 44 | 1.00 |
| 43 | 1.00 |
| 42 | 0.99 |
| 41 | 1.00 |
| 40 | 1.00 |
| 39 | 1.00 |
| 38 | 1.00 |
| 37 | 1.00 |
| 36 | 1.00 |
| 35 | 1.00 |
| 34 | 1.00 |
| 33 | 1.00 |
| 32 | 1.00 |
| 31 | 0.97 |
| 30 | 1.00 |
| 29 | 1.00 |
| 28 | 1.00 |
| 27 | 1.00 |
| 26 | 1.00 |
| 25 | 1.00 |
| 24 | 1.00 |
| 23 | 1.00 |
| 22 | 1.00 |
| 21 | 1.00 |
| 20 | 1.00 |
| 19 | NaN |
| C number | Position in reference DNA | Position in sequencing result (trimmed) | Position in sequencing result (raw) | A peak | T peak | G peak | C peak | Bisulfite conversion rate |
|---|---|---|---|---|---|---|---|---|
| 50 | 146 | 71 | 79 | 676 | 323 | 0 | 0 | 1.00 |
| 49 | 150 | 75 | 83 | 636 | 367 | 0 | 0 | 1.00 |
| 48 | 151 | 76 | 84 | 546 | 0 | 0 | 1 | 1.00 |
| 47 | 154 | 79 | 87 | 635 | 259 | 0 | 0 | 1.00 |
| 46 | 156 | 81 | 89 | 322 | 1 | 0 | 0 | 1.00 |
| 45 | 157 | 82 | 90 | 383 | 0 | 0 | 0 | 1.00 |
| 44 | 158 | 83 | 91 | 607 | 0 | 0 | 0 | 1.00 |
| 43 | 166 | 91 | 99 | 699 | 258 | 0 | 2 | 1.00 |
| 42 | 170 | 95 | 103 | 258 | 0 | 2 | 2 | 0.99 |
| 41 | 176 | 101 | 109 | 562 | 0 | 0 | 0 | 1.00 |
| 40 | 184 | 109 | 117 | 518 | 0 | 0 | 0 | 1.00 |
| 39 | 187 | 112 | 120 | 551 | 0 | 0 | 0 | 1.00 |
| 38 | 192 | 117 | 125 | 280 | 0 | 0 | 0 | 1.00 |
| 37 | 204 | 129 | 137 | 418 | 0 | 0 | 0 | 1.00 |
| 36 | 205 | 130 | 138 | 677 | 0 | 0 | 0 | 1.00 |
| 35 | 206 | 131 | 139 | 648 | 0 | 0 | 2 | 1.00 |
| 34 | 209 | 134 | 142 | 301 | 0 | 0 | 0 | 1.00 |
| 33 | 211 | 136 | 144 | 649 | 0 | 0 | 0 | 1.00 |
| 32 | 214 | 139 | 147 | 757 | 52 | 0 | 0 | 1.00 |
| 31 | 218 | 143 | 151 | 464 | 0 | 14 | 3 | 0.97 |
| 30 | 231 | 156 | 164 | 473 | 0 | 0 | 6 | 1.00 |
| 29 | 241 | 166 | 174 | 621 | 0 | 0 | 0 | 1.00 |
| 28 | 247 | 172 | 180 | 530 | 0 | 0 | 0 | 1.00 |
| 27 | 249 | 174 | 182 | 797 | 227 | 0 | 0 | 1.00 |
| 26 | 258 | 183 | 191 | 609 | 0 | 0 | 0 | 1.00 |
| 25 | 262 | 187 | 195 | 717 | 1 | 0 | 0 | 1.00 |
| 24 | 263 | 188 | 196 | 609 | 0 | 0 | 0 | 1.00 |
| 23 | 265 | 190 | 198 | 601 | 180 | 0 | 0 | 1.00 |
| 22 | 268 | 193 | 201 | 688 | 301 | 0 | 0 | 1.00 |
| 21 | 272 | 197 | 205 | 605 | 0 | 0 | 0 | 1.00 |
| 20 | 273 | 198 | 206 | 495 | 0 | 0 | 125 | 1.00 |
| 19 | 274 | 199 | 207 | 0 | 0 | 0 | 596 | NaN |
The maximum aligned sequence corresponds to the maximum sequence covered by at least one correct sequencing.
Length of max aligned sequence : 143 bp
Coordinates of max aligned sequence : chr16:68771007-68771149
Maximum aligned sequence (on bisulfite converted sense sequence from the plus strand sequence) :
## TTTTAGTAATTTTAGGTTAGAGGGTTATCGCGTTTATGCGAGGTCGGGTGGGCGGGTCGTTAGTTTCGTTTTGGGGAGGGGTTCGCGTTGTTGATTGGTTGTGGTCGGTAGGTGAATTTTTAGTTAATTAGCGGTACGGGGGG
| CG number | Chromosome | Start | End | Methylation Percentage Forward | Methylation Percentage Reverse | Methylation Percentage Average | Methylation Percentage SD |
|---|---|---|---|---|---|---|---|
| 16 | chr16 | 68771143 | 68771144 | NA | 0 | 0 | NA |
| 15 | chr16 | 68771138 | 68771139 | NA | 0 | 0 | NA |
| 14 | chr16 | 68771112 | 68771113 | NA | 0 | 0 | NA |
| 13 | chr16 | 68771092 | 68771093 | NA | 0 | 0 | NA |
| 12 | chr16 | 68771090 | 68771091 | NA | 0 | 0 | NA |
| 11 | chr16 | 68771073 | 68771074 | NA | 0 | 0 | NA |
| 10 | chr16 | 68771064 | 68771065 | NA | 0 | 0 | NA |
| 9 | chr16 | 68771059 | 68771060 | NA | 0 | 0 | NA |
| 8 | chr16 | 68771051 | 68771052 | NA | 0 | 0 | NA |
| 7 | chr16 | 68771045 | 68771046 | NA | 0 | 0 | NA |
| 6 | chr16 | 68771037 | 68771038 | NA | 0 | 0 | NA |
| 5 | chr16 | 68771035 | 68771036 | NA | 0 | 0 | NA |
Warning: No sequencing data from foward direction sequencing.
| CG number | Chromosome | Start | End | G position in reference DNA | G position in sequencing result (trimmed) | G position in sequencing result (raw) | A peak | T peak | G peak | C peak | Methylation Percentage |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 16 | chr16 | 68771143 | 68771144 | 138 | 63 | 71 | 329 | 0 | 0 | 0 | 0 |
| 15 | chr16 | 68771138 | 68771139 | 143 | 68 | 76 | 346 | 0 | 0 | 0 | 0 |
| 14 | chr16 | 68771112 | 68771113 | 169 | 94 | 102 | 465 | 0 | 0 | 2 | 0 |
| 13 | chr16 | 68771092 | 68771093 | 189 | 114 | 122 | 422 | 0 | 0 | 177 | 0 |
| 12 | chr16 | 68771090 | 68771091 | 191 | 116 | 124 | 360 | 0 | 0 | 6 | 0 |
| 11 | chr16 | 68771073 | 68771074 | 208 | 133 | 141 | 493 | 0 | 0 | 2 | 0 |
| 10 | chr16 | 68771064 | 68771065 | 217 | 142 | 150 | 434 | 2 | 0 | 2 | 0 |
| 9 | chr16 | 68771059 | 68771060 | 222 | 147 | 155 | 421 | 0 | 0 | 248 | 0 |
| 8 | chr16 | 68771051 | 68771052 | 230 | 155 | 163 | 463 | 0 | 0 | 187 | 0 |
| 7 | chr16 | 68771045 | 68771046 | 236 | 161 | 169 | 381 | 0 | 0 | 223 | 0 |
| 6 | chr16 | 68771037 | 68771038 | 244 | 169 | 177 | 384 | 0 | 0 | 175 | 0 |
| 5 | chr16 | 68771035 | 68771036 | 246 | 171 | 179 | 417 | 0 | 0 | 0 | 0 |
CDH1_Low methylated DNA_3_aligned_DNAref_R.fasta
CDH1_Low methylated DNA_3_aligned_max_seq.fasta
CDH1_Low methylated DNA_3_chromatogram_1.pdf
CDH1_Low methylated DNA_3_bisconv_table.csv
CDH1_Low methylated DNA_3_bisconv_table.png
CDH1_Low methylated DNA_3_bisconv_table.xlsx
CDH1_Low methylated DNA_3_meth_table.csv
CDH1_Low methylated DNA_3_meth_table.png
CDH1_Low methylated DNA_3_meth_table.xlsx
CDH1_Low methylated DNA_3_QC.png
CDH1_Low methylated DNA_3_QC_table.csv
CDH1_Low methylated DNA_3_QC_table.xlsx
CDH1_Low methylated DNA_3_seqtable_1.csv
CDH1_Low methylated DNA_3_seqtable_1.xlsx
CDH1_Low methylated DNA_3_seqtable_2.csv
CDH1_Low methylated DNA_3_seqtable_2.xlsx
CDH1_Low methylated DNA_3_seqtable_trimmed_2.csv
CDH1_Low methylated DNA_3_seqtable_trimmed_2.xlsx
CDH1_Low methylated DNA_3_trimmedseq.png
| CG_nb | chromosome | start | end | meth_F | meth_R | meth_avg | meth_sd | collection | group | rep | clone | alg_coord_start | alg_coord_end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16 | chr16 | 68771143 | 68771144 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 15 | chr16 | 68771138 | 68771139 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 14 | chr16 | 68771112 | 68771113 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 13 | chr16 | 68771092 | 68771093 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 12 | chr16 | 68771090 | 68771091 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 11 | chr16 | 68771073 | 68771074 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 10 | chr16 | 68771064 | 68771065 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 9 | chr16 | 68771059 | 68771060 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 8 | chr16 | 68771051 | 68771052 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 7 | chr16 | 68771045 | 68771046 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 6 | chr16 | 68771037 | 68771038 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 | |
| 5 | chr16 | 68771035 | 68771036 | NA | 0 | 0 | NA | Low methylated DNA | 3 | NA | 68771007 | 68771149 |